RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 MAGEC3Q8TD91 643 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 PAPOLBQ9NRJ5 636 aaKnown RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 PTPRGP23470 1445 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 AQRO60306 1485 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 CLCN2P51788 898 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC152Q4G0S7 254 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 TMX3Q96JJ7 454 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 COMMD8Q9NX08 183 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 KLHL42Q9P2K6 505 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ZMAT5Q9UDW3 170 aaKnown RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 PAIP2BQ9ULR5 123 aaKnown RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 PRPF40AO75400 957 aaKnown RBP7.04□□□□□ -1.28
PDE4D-216ENST00000507116 TSPY4P0CV99 314 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 TSPY10P0CW01 314 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 EIF4G2P78344 907 aaKnown RBP eCLIP7.04□□□□□ -1.28
PDE4D-216ENST00000507116 SMUG1Q53HV7 270 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 CEP85LQ5SZL2 805 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 DPY19L2Q6NUT2 758 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 ARHGEF25Q86VW2 580 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 CROTQ9UKG9 612 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 SPO11Q9Y5K1 396 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 TOP2AP11388 1531 aaKnown RBP7.04□□□□□ -1.28
PDE4D-216ENST00000507116 KIF21AQ7Z4S6 1674 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 TMEM110-MUSTN1A8MSY1 372 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 ALOX15P16050 662 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-216ENST00000507116 DCTN1Q14203 1278 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 ERCC6LQ2NKX8 1250 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 ATF7IPQ6VMQ6 1270 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 SYCP3Q8IZU3 236 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 TUBGCP4Q9UGJ1 667 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 CFTRP13569 1480 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 GOLGA3Q08378 1498 aa7.04□□□□□ -1.28
PDE4D-216ENST00000507116 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TBC1D8O95759 1140 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 MATR3P43243 847 aaKnown RBP eCLIP7.03□□□□□ -1.282e-6■■■■□ 21.3
PDE4D-216ENST00000507116 PTPN14Q15678 1187 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NAA16Q6N069 864 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NANOGNBQ7Z5D8 188 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 VTI1AQ96AJ9 217 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 HOOK2Q96ED9 719 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 VMP1Q96GC9 406 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 CORO1CQ9ULV4 474 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 MCM3P25205 808 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 BTG3Q14201 252 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 EIF4A2Q14240 407 aaKnown RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TCHPQ9BT92 498 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC68Q9H2F9 335 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TAOK3Q9H2K8 898 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NRDE2Q9H7Z3 1164 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NLRP2Q9NX02 1062 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 YEATS2Q9ULM3 1422 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 ATXN2Q99700 1313 aaKnown RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 EBAG9O00559 213 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NPHP1O15259 732 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 KDM1AO60341 852 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 FGFR1OPO95684 399 aaKnown RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 ARPC4P59998 168 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 ATP2B2Q01814 1243 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TRIM29Q14134 588 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 VPS53Q5VIR6 699 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 AGAP9Q5VTM2 703 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 NEK10Q6ZWH5 1172 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 WAPLQ7Z5K2 1190 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 GALNT15Q8N3T1 639 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TRIM58Q8NG06 486 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 TSC22D3Q99576 134 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-216ENST00000507116 HELLSQ9NRZ9 838 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 VPS18Q9P253 973 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 FAM169AQ9Y6X4 670 aa7.03□□□□□ -1.28
PDE4D-216ENST00000507116 CCNB3Q8WWL7 1395 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CYP27B1O15528 508 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SLC8A1P32418 973 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CSE1LP55060 971 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 INHBCP55103 352 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 DMPKQ09013 629 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 DYNC1I2Q13409 638 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CCDC38Q502W7 563 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 COBLL1Q53SF7 1204 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 MIGA1Q8NAN2 632 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 ZNF280CQ8ND82 737 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SREK1Q8WXA9 508 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CLIP3Q96DZ5 547 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SENP7Q9BQF6 1050 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 PRELID1Q9Y255 219 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 GMEB1Q9Y692 573 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 LIN7AO14910 233 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SRGAP3O43295 1099 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms