RNA–Protein interactions for RNA: ENST00000506661.2

HOPX-208, Transcript of HOP homeobox, human

Gene HOPX, Length 2,540 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOPX-208	ENST00000506661	GPT2	Q8TD30	523 aa		10.15	□□□□□ -0.78
HOPX-208	ENST00000506661	ATRIP	Q8WXE1	791 aa		10.15	□□□□□ -0.78
HOPX-208	ENST00000506661	CENPO	Q9BU64	300 aa		10.15	□□□□□ -0.78
HOPX-208	ENST00000506661	RABL2B	Q9UNT1	228 aa		10.15	□□□□□ -0.78
HOPX-208	ENST00000506661	RABGAP1	Q9Y3P9	1069 aa		10.15	□□□□□ -0.78
HOPX-208	ENST00000506661	ZFYVE16	Q7Z3T8	1539 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	DNAJC21	Q5F1R6	531 aa	Known RBP	10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	PGBD3	Q8N328	593 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	GCC1	Q96CN9	775 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	ACAD8	Q9UKU7	415 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	PLCH2	O75038	1416 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	CPS1	P31327	1500 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661		A6NJY4	79 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	KIF3B	O15066	747 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	CAND2	O75155	1236 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	KIF20A	O95235	890 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	RAPGEF3	O95398	923 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	SASS6	Q6UVJ0	657 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	TEX19	Q8NA77	164 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	DNAJC25	Q9H1X3	360 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	RMI1	Q9H9A7	625 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	SUN2	Q9UH99	717 aa		10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	COL3A1	P02461	1466 aa	Predicted RBP	10.14	□□□□□ -0.79
HOPX-208	ENST00000506661	GRXCR2	A6NFK2	248 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	MAP3K13	O43283	966 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	SKIL	P12757	684 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	RABEP1	Q15276	862 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	DZIP3	Q86Y13	1208 aa	Known RBP	10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	CLASRP	Q8N2M8	674 aa	Known RBP	10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	MRFAP1L1	Q96HT8	127 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	ZBTB7B	O15156	539 aa	Predicted RBP	10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	CDC45	O75419	566 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	TMEM259	Q4ZIN3	620 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	LRSAM1	Q6UWE0	723 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	NELL1	Q92832	810 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	CDHR1	Q96JP9	859 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	DUSP9	Q99956	384 aa	Known RBP	10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	NSD2	O96028	1365 aa		10.13	□□□□□ -0.79
HOPX-208	ENST00000506661	GOLGA6L6	A8MZA4	724 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	PRKAR2A	P13861	404 aa	Known RBP	10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	GSPT1	P15170	499 aa	Known RBP	10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	SSTR3	P32745	418 aa	Predicted RBP	10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	DMTN	Q08495	405 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	KIAA2012	Q0VF49	1180 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	COL19A1	Q14993	1142 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	SIRT2	Q8IXJ6	389 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	ZDHHC9	Q9Y397	364 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	PRPF40A	O75400	957 aa	Known RBP	10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	MAPK1	P28482	360 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	PPP2R5A	Q15172	486 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	CCDC39	Q9UFE4	941 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	ADGRB1	O14514	1584 aa		10.12	□□□□□ -0.79
HOPX-208	ENST00000506661	PPP1R3G	B7ZBB8	358 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	FOSL1	P15407	271 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	GEMIN4	P57678	1058 aa	Known RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	NFX1	Q12986	1120 aa	Known RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	TAF11	Q15544	211 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	TMEM87B	Q96K49	555 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	PIK3R4	Q99570	1358 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661		A0A1W2PRQ8	180 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	DPYSL4	O14531	572 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	CTAGE5	O15320	804 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	KIF1C	O43896	1103 aa	Known RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	CCDC172	P0C7W6	258 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	SEC13	P55735	322 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	GRAMD1B	Q3KR37	738 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	ZNF394	Q53GI3	561 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	MCF2L2	Q86YR7	1114 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	ZNF579	Q8NAF0	562 aa	Known RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	ALG2	Q9H553	416 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	KANSL2	Q9H9L4	492 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	TRAK1	Q9UPV9	953 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	MROH1	Q8NDA8	1641 aa		10.11	□□□□□ -0.79
HOPX-208	ENST00000506661	ANKRD36B	Q8N2N9	1353 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	SYCE3	A1L190	88 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	TSPAN6	O43657	245 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	IPO7	O95373	1038 aa	Known RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	RPN1	P04843	607 aa	Known RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	MYL3	P08590	195 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	ZNF132	P52740	706 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	ARID5A	Q03989	594 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	EAPP	Q56P03	285 aa	Predicted RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	LCA5	Q86VQ0	697 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	MYO1H	Q8N1T3	1032 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	ZGPAT	Q8N5A5	531 aa	Known RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	FRS2	Q8WU20	508 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	TMUB1	Q9BVT8	246 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	PPP2R3B	Q9Y5P8	575 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	PTCH1	Q13635	1447 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	SPAG9	O60271	1321 aa	Known RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	hCG_1984214	I3L0E3	225 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	MYL1	P05976	194 aa		10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	ZSCAN20	P17040	1043 aa	Predicted RBP	10.1	□□□□□ -0.79
HOPX-208	ENST00000506661	TSPAN7	P41732	249 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms