RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PODNQ7Z5L7 613 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
GYPB-206ENST00000506516 GPR101Q96P66 508 aaPredicted RBP9.05□□□□□ -0.96
GYPB-206ENST00000506516 DBNDD1Q9H9R9 158 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 NMRK2Q9NPI5 230 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 RIPOR2Q9Y4F9 1068 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 SBF1O95248 1867 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
GYPB-206ENST00000506516 SRGAP3O43295 1099 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 ECE2O60344 883 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 RAD17O75943 681 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 TOMM70O94826 608 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
GYPB-206ENST00000506516 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
GYPB-206ENST00000506516 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 METTL24Q5JXM2 366 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 PANK1Q8TE04 598 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
GYPB-206ENST00000506516 PUS3Q9BZE2 481 aaKnown RBP9.04□□□□□ -0.96
GYPB-206ENST00000506516 COA1Q9GZY4 146 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
GYPB-206ENST00000506516 MED23Q9ULK4 1368 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 TAF1P21675 1872 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 TESPA1A2RU30 521 aaPredicted RBP9.03□□□□□ -0.96
GYPB-206ENST00000506516 POTEMA6NI47 508 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 WTIPA6NIX2 430 aaPredicted RBP9.03□□□□□ -0.96
GYPB-206ENST00000506516 YDJCA8MPS7 323 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 POTECB2RU33 542 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 EYA2O00167 538 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 DPYSL4O14531 572 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 PDE8BO95263 885 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 RLBP1P12271 317 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
GYPB-206ENST00000506516 MTX1Q13505 466 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
GYPB-206ENST00000506516 LRRC24Q50LG9 513 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 PNMA8AQ86V59 439 aaPredicted RBP9.03□□□□□ -0.96
GYPB-206ENST00000506516 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 DDX19BQ9UMR2 479 aa9.03□□□□□ -0.96
GYPB-206ENST00000506516 MYH3P11055 1940 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 COL4A1P02462 1669 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 CIAO1O76071 339 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 IL15P40933 162 aaPredicted RBP9.02□□□□□ -0.97
GYPB-206ENST00000506516 C1QTNF8P60827 252 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 ATP8B2P98198 1209 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 CAVIN4Q5BKX8 364 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 POTEGQ6S5H5 508 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 C15orf52Q6ZUT6 534 aaKnown RBP9.02□□□□□ -0.97
GYPB-206ENST00000506516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.02□□□□□ -0.97
GYPB-206ENST00000506516 ZNF804AQ7Z570 1209 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.97
GYPB-206ENST00000506516 COPRSQ9NQ92 184 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 COG6Q9Y2V7 657 aa9.02□□□□□ -0.97
GYPB-206ENST00000506516 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 H7C1D1 291 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 PSMD14O00487 310 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 RPS12P25398 132 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 HIBADHP31937 336 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 EPHX2P34913 555 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 GMPSP49915 693 aaPredicted RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
GYPB-206ENST00000506516 CCDC88AQ3V6T2 1871 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 TTLL5Q6EMB2 1281 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 VPS37DQ86XT2 251 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 DPF2Q92785 391 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 SIL1Q9H173 461 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 KCNQ5Q9NR82 932 aa9.01□□□□□ -0.97
GYPB-206ENST00000506516 CNOT7Q9UIV1 285 aaKnown RBP9.01□□□□□ -0.97
GYPB-206ENST00000506516 DUOX1Q9NRD9 1551 aa9□□□□□ -0.97
GYPB-206ENST00000506516 DICER1Q9UPY3 1922 aaKnown RBP9□□□□□ -0.97
GYPB-206ENST00000506516 SNAP23O00161 211 aa9□□□□□ -0.97
GYPB-206ENST00000506516 SCNN1DP51172 638 aa9□□□□□ -0.97
GYPB-206ENST00000506516 FSTL1Q12841 308 aa9□□□□□ -0.97
GYPB-206ENST00000506516 PUM3Q15397 648 aaKnown RBP9□□□□□ -0.97
GYPB-206ENST00000506516 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
GYPB-206ENST00000506516 STRIP1Q5VSL9 837 aa9□□□□□ -0.97
GYPB-206ENST00000506516 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
GYPB-206ENST00000506516 USP50Q70EL3 339 aaPredicted RBP9□□□□□ -0.97
GYPB-206ENST00000506516 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
GYPB-206ENST00000506516 SMC1BQ8NDV3 1235 aa9□□□□□ -0.97
GYPB-206ENST00000506516 AGBL3Q8NEM8 1001 aa9□□□□□ -0.97
GYPB-206ENST00000506516 LPIN2Q92539 896 aa9□□□□□ -0.97
GYPB-206ENST00000506516 FBXW7Q969H0 707 aa9□□□□□ -0.97
GYPB-206ENST00000506516 C1orf115Q9H7X2 142 aa9□□□□□ -0.97
GYPB-206ENST00000506516 ADARB2Q9NS39 739 aaKnown RBP9□□□□□ -0.97
GYPB-206ENST00000506516 GPRC5DQ9NZD1 345 aa9□□□□□ -0.97
GYPB-206ENST00000506516 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
GYPB-206ENST00000506516 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms