RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 CNPY2Q9Y2B0 182 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 VPS37CA5D8V6 355 aaPredicted RBP8.65□□□□□ -1.02
TNPO1-204ENST00000506351 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 TBC1D9BQ66K14 1250 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 USP48Q86UV5 1035 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 BRF1Q92994 677 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 ATP6V1DQ9Y5K8 247 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 BAZ2AQ9UIF9 1905 aaKnown RBP8.65□□□□□ -1.03
TNPO1-204ENST00000506351 RPS6KA4O75676 772 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 PDE6AP16499 860 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 CHRNDQ07001 517 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 IMMTQ16891 758 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SLC9C2Q5TAH2 1124 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SPATA5Q8NB90 893 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 CDC5LQ99459 802 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 NARFQ9UHQ1 456 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 ZNF532Q9HCE3 1301 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 DLEC1Q9Y238 1755 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SNAP23O00161 211 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 PFKFB2O60825 505 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 IDH1O75874 414 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 PDCP20941 246 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SF3B3Q15393 1217 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SMIM5Q71RC9 77 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 CDC37L1Q7L3B6 337 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 CCNL1Q9UK58 526 aaPredicted RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 AFF2P51816 1311 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 COL1A1P02452 1464 aaPredicted RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 GNPATO15228 680 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 FGAP02671 866 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SCRN1Q12765 414 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
TNPO1-204ENST00000506351 GJD4Q96KN9 370 aaPredicted RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
TNPO1-204ENST00000506351 MYH6P13533 1939 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 JAK2O60674 1132 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 HAND2P61296 217 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 FGD1P98174 961 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 FBXL16Q8N461 479 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 MB21D2Q8IYB1 491 aaPredicted RBP8.63□□□□□ -1.03
TNPO1-204ENST00000506351 SMARCC2Q8TAQ2 1214 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 LLPHQ9BRT6 129 aaKnown RBP8.63□□□□□ -1.03
TNPO1-204ENST00000506351 NYXQ9GZU5 481 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 ZMYM6O95789 1325 aa8.63□□□□□ -1.03
TNPO1-204ENST00000506351 FIBPO43427 364 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 ZNF804BA4D1E1 1349 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 WDR19Q8NEZ3 1342 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 BCAMP50895 628 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 AMIGO3Q86WK7 504 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 NSUN7Q8NE18 718 aaKnown RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 SYAP1Q96A49 352 aaPredicted RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 SALL1Q9NSC2 1324 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 MYH2Q9UKX2 1941 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 ZNF213O14771 459 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 ZPR1O75312 459 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 CTDNEP1O95476 244 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 HSPA1LP34931 641 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 UBE2HP62256 183 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 MAP3K12Q12852 859 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 MAGEB6Q8N7X4 407 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 NCOA7Q8NI08 942 aa8.62□□□□□ -1.03
TNPO1-204ENST00000506351 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
TNPO1-204ENST00000506351 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 SYCE3A1L190 88 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 PRC1O43663 620 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 EVCP57679 992 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 ANTXR2P58335 489 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 LRSAM1Q6UWE0 723 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 TBC1D10CQ8IV04 446 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 STRBPQ96SI9 672 aaKnown RBP8.61□□□□□ -1.03
TNPO1-204ENST00000506351 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 PTPDC1A2A3K4 754 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
TNPO1-204ENST00000506351 PDIA3P30101 505 aaKnown RBP8.61□□□□□ -1.03
TNPO1-204ENST00000506351 MCM5P33992 734 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 FERMT3Q86UX7 667 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 CELF1Q92879 486 aaKnown RBP8.61□□□□□ -1.03
TNPO1-204ENST00000506351 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
TNPO1-204ENST00000506351 MBD4O95243 580 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms