RNA–Protein interactions for RNA: ENST00000506175.1

YTHDC1-204, Transcript of YTH domain containing 1, humanhuman

TSL 3

Gene YTHDC1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-204ENST00000506175 COL15A1P39059 1388 aa8.57□□□□□ -1.04
YTHDC1-204ENST00000506175 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 SRGAP3O43295 1099 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 GDF9O60383 454 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 DGAT1O75907 488 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 NUCB1Q02818 461 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 MTMR2Q13614 643 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 RC3H1Q5TC82 1133 aaKnown RBP8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 CHD1LQ86WJ1 897 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 SIRT2Q8IXJ6 389 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
YTHDC1-204ENST00000506175 DDX60Q8IY21 1712 aaKnown RBP8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 TUBGCP6Q96RT7 1819 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 SPTLC1O15269 473 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 TRIM37O94972 964 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 TRIM28Q13263 835 aaKnown RBP8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 MTX1Q13505 466 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 RSBN1LQ6PCB5 846 aaPredicted RBP8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 LINC00116Q8NCU8 138 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 SSH3Q8TE77 659 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 ISCA1Q9BUE6 129 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 TBC1D2BQ9UPU7 963 aa8.55□□□□□ -1.04
YTHDC1-204ENST00000506175 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 APBB1O00213 710 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 RPS6KA4O75676 772 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 SURF6O75683 361 aaKnown RBP8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 NDUFV2P19404 249 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 ERC1Q8IUD2 1116 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 SUCLG2Q96I99 432 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 LRRCC1Q9C099 1032 aa8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 BICC1Q9H694 974 aaKnown RBP8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 RTCBQ9Y3I0 505 aaKnown RBP8.54□□□□□ -1.04
YTHDC1-204ENST00000506175 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 H7C1W4 665 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 PCCAP05165 728 aaPredicted RBP8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 GPTP24298 496 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 TRIM32Q13049 653 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 G3BP1Q13283 466 aaKnown RBP eCLIP8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 PTF1AQ7RTS3 328 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 ZBTB38Q8NAP3 1195 aaPredicted RBP8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 CHMP3Q9Y3E7 222 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 QSER1Q2KHR3 1735 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 CDHR2Q9BYE9 1310 aa8.53□□□□□ -1.04
YTHDC1-204ENST00000506175 WNT7BP56706 349 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 HLFQ16534 295 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 PTPRNQ16849 979 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 NLRP10Q86W26 655 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 SKAP1Q86WV1 359 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 KIF1BPQ96EK5 621 aa8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 TRMT112Q9UI30 125 aaKnown RBP8.52□□□□□ -1.05
YTHDC1-204ENST00000506175 CAMTA2O94983 1202 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 APBA3O96018 575 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 RFC4P35249 363 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 KCNQ4P56696 695 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 TAF7LQ5H9L4 462 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 NUDT12Q9BQG2 462 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 UTP14AQ9BVJ6 771 aaKnown RBP8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 NARFQ9UHQ1 456 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 NIP7Q9Y221 180 aaKnown RBP eCLIP8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 SH3TC1Q8TE82 1336 aa8.51□□□□□ -1.05
YTHDC1-204ENST00000506175 MYH7P12883 1935 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 MYH13Q9UKX3 1938 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 WNT7AO00755 349 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 PLSCR1O15162 318 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 CCNYL3P0C7X3 344 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 CASP7P55210 303 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
YTHDC1-204ENST00000506175 CCDC57Q2TAC2 916 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms