RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 ZNF804AQ7Z570 1209 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 CLMNQ96JQ2 1002 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 DEFB129Q9H1M3 183 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 CD209Q9NNX6 404 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 PCDHAC2Q9Y5I4 1007 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 CACNA1FO60840 1977 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 ZNF609O15014 1411 aa10.5□□□□□ -0.73
SNF8-204ENST00000506104 MANSC4A6NHS7 340 aaPredicted RBP10.5□□□□□ -0.73
SNF8-204ENST00000506104 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
SNF8-204ENST00000506104 FLIIQ13045 1269 aa10.5□□□□□ -0.73
SNF8-204ENST00000506104 IFIT5Q13325 482 aaKnown RBP10.5□□□□□ -0.73
SNF8-204ENST00000506104 CFAP100Q494V2 611 aa10.5□□□□□ -0.73
SNF8-204ENST00000506104 DNAAF4Q8WXU2 420 aa10.5□□□□□ -0.73
SNF8-204ENST00000506104 CNNM1Q9NRU3 951 aa10.5□□□□□ -0.73
SNF8-204ENST00000506104 A0A1B0GUL6 1792 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 AK9Q5TCS8 1911 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
SNF8-204ENST00000506104 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 MYCP01106 439 aaPredicted RBP10.49□□□□□ -0.73
SNF8-204ENST00000506104 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
SNF8-204ENST00000506104 OTUD7BQ6GQQ9 843 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 WNK4Q96J92 1243 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 ZNF594Q96JF6 807 aaPredicted RBP10.49□□□□□ -0.73
SNF8-204ENST00000506104 ELP3Q9H9T3 547 aa10.49□□□□□ -0.73
SNF8-204ENST00000506104 F6X3S4 739 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 CCDC57Q2TAC2 916 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 SUPT20HL1Q3ZLR7 823 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 NBPF12Q5TAG4 269 aaPredicted RBP10.48□□□□□ -0.73
SNF8-204ENST00000506104 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
SNF8-204ENST00000506104 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
SNF8-204ENST00000506104 CHAF1AQ13111 956 aaPredicted RBP10.47□□□□□ -0.73
SNF8-204ENST00000506104 CCDC184Q52MB2 194 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 WWC1Q8IX03 1113 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 LINS1Q8NG48 757 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 ERO1AQ96HE7 468 aa10.47□□□□□ -0.73
SNF8-204ENST00000506104 PRMT6Q96LA8 375 aaPredicted RBP10.47□□□□□ -0.73
SNF8-204ENST00000506104 C9orf78Q9NZ63 289 aaPredicted RBP10.47□□□□□ -0.73
SNF8-204ENST00000506104 TCP10L2B9ZVM9 353 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 IGF2BP3O00425 579 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNF8-204ENST00000506104 MMP14P50281 582 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 INHBEP58166 350 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.73
SNF8-204ENST00000506104 CRHR2Q13324 411 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 RASA3Q14644 834 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 LDLRAD1Q5T700 205 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 OTOP1Q7RTM1 612 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 VPS37DQ86XT2 251 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 TDRD3Q9H7E2 651 aaKnown RBP10.46□□□□□ -0.73
SNF8-204ENST00000506104 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 MRS2Q9HD23 443 aa10.46□□□□□ -0.73
SNF8-204ENST00000506104 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
SNF8-204ENST00000506104 IQSEC3Q9UPP2 1182 aaPredicted RBP10.46□□□□□ -0.73
SNF8-204ENST00000506104 OTOFQ9HC10 1997 aa10.46□□□□□ -0.74
SNF8-204ENST00000506104 TNRC18O15417 2968 aaPredicted RBP10.46□□□□□ -0.74
SNF8-204ENST00000506104 COL1A1P02452 1464 aaPredicted RBP10.45□□□□□ -0.74
SNF8-204ENST00000506104 AOX1Q06278 1338 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 SPDYE2BA6NHP3 402 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 CSF1RP07333 972 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 SPDYE6P0CI01 402 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 ZBTB48P10074 688 aaPredicted RBP10.45□□□□□ -0.74
SNF8-204ENST00000506104 GYG1P46976 350 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 CASP7P55210 303 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 ANKRD13AQ8IZ07 590 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 OPTNQ96CV9 577 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 TMEM106CQ9BVX2 250 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 PPP2R3BQ9Y5P8 575 aa10.45□□□□□ -0.74
SNF8-204ENST00000506104 USP2O75604 605 aaPredicted RBP10.44□□□□□ -0.74
SNF8-204ENST00000506104 TNNI2P48788 182 aa10.44□□□□□ -0.74
SNF8-204ENST00000506104 FOXO4P98177 505 aa10.44□□□□□ -0.74
SNF8-204ENST00000506104 TNFAIP1Q13829 316 aa10.44□□□□□ -0.74
SNF8-204ENST00000506104 TAF1CQ15572 869 aaPredicted RBP10.44□□□□□ -0.74
SNF8-204ENST00000506104 SLC4A8Q2Y0W8 1093 aa10.44□□□□□ -0.74
SNF8-204ENST00000506104 ZBED3Q96IU2 234 aaPredicted RBP10.44□□□□□ -0.74
SNF8-204ENST00000506104 ZNF70Q9UC06 446 aaPredicted RBP10.44□□□□□ -0.74
SNF8-204ENST00000506104 SSC5DA1L4H1 1573 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 IL1R1P14778 569 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 EN2P19622 333 aaPredicted RBP10.43□□□□□ -0.74
SNF8-204ENST00000506104 HIBADHP31937 336 aaKnown RBP10.43□□□□□ -0.74
SNF8-204ENST00000506104 GJA5P36382 358 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 SP3Q02447 781 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
SNF8-204ENST00000506104 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 INTS3Q68E01 1043 aaKnown RBP10.43□□□□□ -0.74
SNF8-204ENST00000506104 GCC1Q96CN9 775 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 PTPN22Q9Y2R2 807 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 CSADQ9Y600 493 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 MYH13Q9UKX3 1938 aa10.43□□□□□ -0.74
SNF8-204ENST00000506104 CCL15-CCL14A0A0B4J2E2 113 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 GRM8O00222 908 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms