RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DTWD1Q8N5C7 304 aa9.68□□□□□ -0.86
NIPBL-205ENST00000505998 A0A0A0MRY4 1105 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 H3BRJ5 948 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 EIF4BP23588 611 aaKnown RBP9.67□□□□□ -0.86
NIPBL-205ENST00000505998 ITPKAP23677 461 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 DAB2P98082 770 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 ILDR2Q71H61 639 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 MRS2Q9HD23 443 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 AK5Q9Y6K8 562 aa9.67□□□□□ -0.86
NIPBL-205ENST00000505998 RBM47A0AV96 593 aaKnown RBP9.66□□□□□ -0.86
NIPBL-205ENST00000505998 XRCC5P13010 732 aaKnown RBP9.66□□□□□ -0.86
NIPBL-205ENST00000505998 GSTT1P30711 240 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 ITGAEP38570 1179 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
NIPBL-205ENST00000505998 TMC4Q7Z404 712 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 FAM161BQ96MY7 647 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 CLEC4MQ9H2X3 399 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-205ENST00000505998 ZFYVE1Q9HBF4 777 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
NIPBL-205ENST00000505998 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
NIPBL-205ENST00000505998 FAM229AH3BQW9 127 aa9.65□□□□□ -0.86
NIPBL-205ENST00000505998 IKBKEQ14164 716 aa9.65□□□□□ -0.86
NIPBL-205ENST00000505998 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
NIPBL-205ENST00000505998 ZNF576Q9H609 170 aa9.65□□□□□ -0.86
NIPBL-205ENST00000505998 SORBS3O60504 671 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 ARL4DP49703 201 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 PCDH1Q08174 1060 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 SETDB1Q15047 1291 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 SLC7A3Q8WY07 619 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
NIPBL-205ENST00000505998 FSCN2O14926 492 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-205ENST00000505998 COL8A1P27658 744 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 WNT8BQ93098 351 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 CARD10Q9BWT7 1032 aa9.63□□□□□ -0.87
NIPBL-205ENST00000505998 SOX1O00570 391 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-205ENST00000505998 DEAF1O75398 565 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-205ENST00000505998 SPATA31C1P0DKV0 1188 aa9.62□□□□□ -0.87
NIPBL-205ENST00000505998 RPS26P11Q5JNZ5 115 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-205ENST00000505998 OSGEPQ9NPF4 335 aa9.62□□□□□ -0.87
NIPBL-205ENST00000505998 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
NIPBL-205ENST00000505998 VTI1BQ9UEU0 232 aa9.62□□□□□ -0.87
NIPBL-205ENST00000505998 ELNP15502 786 aa9.61□□□□□ -0.87
NIPBL-205ENST00000505998 C19orf57Q0VDD7 668 aa9.61□□□□□ -0.87
NIPBL-205ENST00000505998 ALYREFQ86V81 257 aaKnown RBP9.61□□□□□ -0.87
NIPBL-205ENST00000505998 KLHL23Q8NBE8 558 aa9.61□□□□□ -0.87
NIPBL-205ENST00000505998 C3orf58Q8NDZ4 430 aa9.61□□□□□ -0.87
NIPBL-205ENST00000505998 ZNF423Q2M1K9 1284 aa9.6□□□□□ -0.87
NIPBL-205ENST00000505998 GALNT11Q8NCW6 608 aa9.6□□□□□ -0.87
NIPBL-205ENST00000505998 SUZ12Q15022 739 aaKnown RBP9.59□□□□□ -0.87
NIPBL-205ENST00000505998 HGSNATQ68CP4 663 aa9.59□□□□□ -0.87
NIPBL-205ENST00000505998 DDX54Q8TDD1 881 aaKnown RBP9.59□□□□□ -0.87
NIPBL-205ENST00000505998 KLHDC7BQ96G42 594 aa9.59□□□□□ -0.87
NIPBL-205ENST00000505998 SOX17Q9H6I2 414 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-205ENST00000505998 GPN3Q9UHW5 284 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-205ENST00000505998 PPM1HQ9ULR3 514 aa9.59□□□□□ -0.87
NIPBL-205ENST00000505998 DLL1O00548 723 aa9.58□□□□□ -0.88
NIPBL-205ENST00000505998 B3GALT4O96024 378 aa9.58□□□□□ -0.88
NIPBL-205ENST00000505998 CD68P34810 354 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-205ENST00000505998 GSTM4Q03013 218 aa9.58□□□□□ -0.88
NIPBL-205ENST00000505998 KCNMA1Q12791 1236 aa9.58□□□□□ -0.88
NIPBL-205ENST00000505998 GRIK4Q16099 956 aa9.58□□□□□ -0.88
NIPBL-205ENST00000505998 TTF2Q9UNY4 1162 aaKnown RBP9.58□□□□□ -0.88
NIPBL-205ENST00000505998 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-205ENST00000505998 APBA3O96018 575 aa9.57□□□□□ -0.88
NIPBL-205ENST00000505998 ZNF157P51786 506 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-205ENST00000505998 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
NIPBL-205ENST00000505998 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
NIPBL-205ENST00000505998 PPP2R3AQ06190 1150 aa9.56□□□□□ -0.88
NIPBL-205ENST00000505998 MRPL58Q14197 206 aaKnown RBP9.56□□□□□ -0.88
NIPBL-205ENST00000505998 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
NIPBL-205ENST00000505998 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
NIPBL-205ENST00000505998 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
NIPBL-205ENST00000505998 TMEM39AQ9NV64 488 aa9.56□□□□□ -0.88
NIPBL-205ENST00000505998 FBXO24O75426 580 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 CTSHP09668 335 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 NLRP12P59046 1061 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 RASSF7Q02833 373 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-205ENST00000505998 IGF2-ASQ6U949 168 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-205ENST00000505998 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 DCAF5Q96JK2 942 aa9.55□□□□□ -0.88
NIPBL-205ENST00000505998 TM4SF5O14894 197 aa9.54□□□□□ -0.88
NIPBL-205ENST00000505998 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
NIPBL-205ENST00000505998 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-205ENST00000505998 MEI1Q5TIA1 1274 aa9.54□□□□□ -0.88
NIPBL-205ENST00000505998 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
NIPBL-205ENST00000505998 KCNK4Q9NYG8 393 aa9.54□□□□□ -0.88
NIPBL-205ENST00000505998 USP21Q9UK80 565 aa9.54□□□□□ -0.88
NIPBL-205ENST00000505998 C9orf172C9J069 976 aa9.53□□□□□ -0.88
NIPBL-205ENST00000505998 CYP11A1P05108 521 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms