RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 GNRH1P01148 92 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 CSF1RP07333 972 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 TNNI2P48788 182 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 RBM5P52756 815 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEDD9-210ENST00000505589 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
NEDD9-210ENST00000505589 CHRNDQ07001 517 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 KIF22Q14807 665 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
NEDD9-210ENST00000505589 APAF1O14727 1248 aa12.63□□□□□ -0.39
NEDD9-210ENST00000505589 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
NEDD9-210ENST00000505589 IL1R1P14778 569 aa12.63□□□□□ -0.39
NEDD9-210ENST00000505589 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
NEDD9-210ENST00000505589 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
NEDD9-210ENST00000505589 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
NEDD9-210ENST00000505589 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
NEDD9-210ENST00000505589 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEDD9-210ENST00000505589 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 GTF2A2P52657 109 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 PRMT2P55345 433 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 CRHR2Q13324 411 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 GCKRQ14397 625 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 CD99L2Q8TCZ2 262 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
NEDD9-210ENST00000505589 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 RASA3Q14644 834 aa12.61□□□□□ -0.39
NEDD9-210ENST00000505589 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
NEDD9-210ENST00000505589 PRMT6Q96LA8 375 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
NEDD9-210ENST00000505589 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
NEDD9-210ENST00000505589 CSADQ9Y600 493 aa12.61□□□□□ -0.39
NEDD9-210ENST00000505589 CAPN2P17655 700 aa12.6□□□□□ -0.39
NEDD9-210ENST00000505589 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-210ENST00000505589 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
NEDD9-210ENST00000505589 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
NEDD9-210ENST00000505589 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
NEDD9-210ENST00000505589 OPTNQ96CV9 577 aa12.6□□□□□ -0.39
NEDD9-210ENST00000505589 CLMNQ96JQ2 1002 aa12.6□□□□□ -0.39
NEDD9-210ENST00000505589 COL4A1P02462 1669 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 CLRN2A0PK11 232 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
NEDD9-210ENST00000505589 HOXD10P28358 340 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
NEDD9-210ENST00000505589 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
NEDD9-210ENST00000505589 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
NEDD9-210ENST00000505589 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
NEDD9-210ENST00000505589 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
NEDD9-210ENST00000505589 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
NEDD9-210ENST00000505589 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
NEDD9-210ENST00000505589 PTPN18Q99952 460 aa12.58□□□□□ -0.4
NEDD9-210ENST00000505589 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
NEDD9-210ENST00000505589 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
NEDD9-210ENST00000505589 CCL15-CCL14A0A0B4J2E2 113 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 TAF5LO75529 589 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 CETPP11597 493 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEDD9-210ENST00000505589 HDLBPQ00341 1268 aaKnown RBP12.57□□□□□ -0.4
NEDD9-210ENST00000505589 FLIIQ13045 1269 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 UBE4AQ14139 1066 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 CCL15Q16663 113 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 MRIQ9BWK5 157 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 ELP3Q9H9T3 547 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 CNNM1Q9NRU3 951 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-210ENST00000505589 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
NEDD9-210ENST00000505589 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
NEDD9-210ENST00000505589 MYH3P11055 1940 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 TLR2O60603 784 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
NEDD9-210ENST00000505589 CASP7P55210 303 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
NEDD9-210ENST00000505589 MKI67P46013 3256 aaKnown RBP12.56□□□□□ -0.4
NEDD9-210ENST00000505589 PLIN1O60240 522 aa12.55□□□□□ -0.4
NEDD9-210ENST00000505589 KLRK1P26718 216 aa12.55□□□□□ -0.4
NEDD9-210ENST00000505589 SNAPC2Q13487 334 aa12.55□□□□□ -0.4
NEDD9-210ENST00000505589 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
NEDD9-210ENST00000505589 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
NEDD9-210ENST00000505589 HTATIP2Q9BUP3 242 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms