RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 DACT2Q5SW24 774 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 SPTY2D1Q68D10 685 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-220ENST00000505005 ATG9AQ7Z3C6 839 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 PANK1Q8TE04 598 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 SIL1Q9H173 461 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 PDS5AQ29RF7 1337 aaKnown RBP12.13□□□□□ -0.47
NR1I3-220ENST00000505005 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
NR1I3-220ENST00000505005 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
NR1I3-220ENST00000505005 EPS15P42566 896 aa12.13□□□□□ -0.47
NR1I3-220ENST00000505005 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
NR1I3-220ENST00000505005 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
NR1I3-220ENST00000505005 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
NR1I3-220ENST00000505005 RLBP1P12271 317 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
NR1I3-220ENST00000505005 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 GMLQ99445 158 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 SERPINA10Q9UK55 444 aa12.12□□□□□ -0.47
NR1I3-220ENST00000505005 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 NF2P35240 595 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
NR1I3-220ENST00000505005 KLHDC4Q8TBB5 520 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-220ENST00000505005 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-220ENST00000505005 PPP2R3BQ9Y5P8 575 aa12.11□□□□□ -0.47
NR1I3-220ENST00000505005 COL4A5P29400 1685 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 TMEM88BA6NKF7 163 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
NR1I3-220ENST00000505005 GYG1P46976 350 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
NR1I3-220ENST00000505005 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
NR1I3-220ENST00000505005 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
NR1I3-220ENST00000505005 LDHCP07864 332 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 TNNI2P48788 182 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 FKBP1BP68106 108 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 TFCP2Q12800 502 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
NR1I3-220ENST00000505005 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
NR1I3-220ENST00000505005 COL4A1P02462 1669 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 BCAMP50895 628 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 GSTO1P78417 241 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 TBC1D10BQ4KMP7 808 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-220ENST00000505005 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 HHIPL2Q6UWX4 724 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 KIAA0825Q8IV33 1275 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 TEKT1Q969V4 418 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
NR1I3-220ENST00000505005 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
NR1I3-220ENST00000505005 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-220ENST00000505005 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 ITGBL1O95965 494 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-220ENST00000505005 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
NR1I3-220ENST00000505005 ECE1P42892 770 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 RBM5P52756 815 aaKnown RBP eCLIP12.07□□□□□ -0.48
NR1I3-220ENST00000505005 TIMM10P62072 90 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 SCARF1Q14162 830 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 TNNI3KQ59H18 835 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
NR1I3-220ENST00000505005 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 KRT26Q7Z3Y9 468 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 FPGT-TNNI3KV9GXZ4 949 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
NR1I3-220ENST00000505005 ADAMTSL1Q8N6G6 1762 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 WNT10BO00744 389 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
NR1I3-220ENST00000505005 KLRK1P26718 216 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 CHAF1AQ13111 956 aaPredicted RBP12.06□□□□□ -0.48
NR1I3-220ENST00000505005 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
NR1I3-220ENST00000505005 SUPT20HL1Q3ZLR7 823 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 FKBP1CQ5VVH2 108 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 MAP1SQ66K74 1059 aaPredicted RBP12.06□□□□□ -0.48
NR1I3-220ENST00000505005 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 NOL10Q9BSC4 688 aaKnown RBP12.06□□□□□ -0.48
NR1I3-220ENST00000505005 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
NR1I3-220ENST00000505005 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
NR1I3-220ENST00000505005 SNAP23O00161 211 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms