RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CCDC74AQ96AQ1 378 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 SPACA7Q96KW9 195 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 FAM161BQ96MY7 647 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 DUSP9Q99956 384 aaKnown RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 BCL11AQ9H165 835 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 DNAJC25Q9H1X3 360 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 NPHS2Q9NP85 383 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 NLRP2Q9NX02 1062 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 RBM47A0AV96 593 aaKnown RBP5.4□□□□□ -1.54
RFC1-209ENST00000504974 PRPF40AO75400 957 aaKnown RBP5.4□□□□□ -1.54
RFC1-209ENST00000504974 HOXD8P13378 290 aaPredicted RBP5.4□□□□□ -1.54
RFC1-209ENST00000504974 EPHA1P21709 976 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
RFC1-209ENST00000504974 PI16Q6UXB8 463 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 Q8N3U1 123 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 SSBP4Q9BWG4 385 aaPredicted RBP5.4□□□□□ -1.54
RFC1-209ENST00000504974 RBSNQ9H1K0 784 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 MRS2Q9HD23 443 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 LATS2Q9NRM7 1088 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 RNF19AQ9NV58 838 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 PARP2Q9UGN5 583 aa5.4□□□□□ -1.54
RFC1-209ENST00000504974 NFKBIEO00221 500 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 TM4SF5O14894 197 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 KIF4AO95239 1232 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 EDN3P14138 238 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 FGD1P98174 961 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 PSMD2Q13200 908 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 PBX4Q9BYU1 374 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 SALL4Q9UJQ4 1053 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 PPME1Q9Y570 386 aa5.39□□□□□ -1.55
RFC1-209ENST00000504974 CDC27P30260 824 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 ZMYM1Q5SVZ6 1142 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 DTWD1Q8N5C7 304 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 FBF1Q8TES7 1133 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 MRRFQ96E11 262 aaKnown RBP5.38□□□□□ -1.55
RFC1-209ENST00000504974 KLHDC7BQ96G42 594 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 EHD4Q9H223 541 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 SPG7Q9UQ90 795 aa5.38□□□□□ -1.55
RFC1-209ENST00000504974 UNCXA6NJT0 531 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 F8W735 103 aaPredicted RBP5.37□□□□□ -1.55
RFC1-209ENST00000504974 ADAM11O75078 769 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 SMNDC1O75940 238 aaKnown RBP eCLIP5.37□□□□□ -1.55
RFC1-209ENST00000504974 UBASH3BQ8TF42 649 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 UBL7Q96S82 380 aaPredicted RBP5.37□□□□□ -1.55
RFC1-209ENST00000504974 OSMRQ99650 979 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 ZKSCAN3Q9BRR0 538 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 AKTIPQ9H8T0 292 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 DZANK1Q9NVP4 752 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 VTI1BQ9UEU0 232 aa5.37□□□□□ -1.55
RFC1-209ENST00000504974 METTL12A8MUP2 240 aa5.36□□□□□ -1.55
RFC1-209ENST00000504974 GNA15P30679 374 aa5.36□□□□□ -1.55
RFC1-209ENST00000504974 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
RFC1-209ENST00000504974 ASAP3Q8TDY4 903 aa5.36□□□□□ -1.55
RFC1-209ENST00000504974 SLC7A3Q8WY07 619 aa5.36□□□□□ -1.55
RFC1-209ENST00000504974 LIN7BQ9HAP6 207 aa5.36□□□□□ -1.55
RFC1-209ENST00000504974 A0A1W2PP55 124 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 E9PSI1 815 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 FSCN2O14926 492 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 SORBS3O60504 671 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 GLB1P16278 677 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 CD68P34810 354 aaPredicted RBP5.35□□□□□ -1.55
RFC1-209ENST00000504974 NLRP12P59046 1061 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 GRM2Q14416 872 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 NXPE4Q6UWF7 544 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 ACAD11Q709F0 780 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 BCO2Q9BYV7 579 aa5.35□□□□□ -1.55
RFC1-209ENST00000504974 FAM177BA6PVY3 158 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 PDE2AO00408 941 aaPredicted RBP5.34□□□□□ -1.55
RFC1-209ENST00000504974 EIF4BP23588 611 aaKnown RBP5.34□□□□□ -1.55
RFC1-209ENST00000504974 DAB2P98082 770 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 TSNAXIP1Q2TAA8 658 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 KIAA1211Q6ZU35 1233 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.34□□□□□ -1.55
RFC1-209ENST00000504974 TMC4Q7Z404 712 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 OSBPL7Q9BZF2 842 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 MRPL18Q9H0U6 180 aaKnown RBP5.34□□□□□ -1.55
RFC1-209ENST00000504974 PPP4R2Q9NY27 417 aa5.34□□□□□ -1.55
RFC1-209ENST00000504974 SCO2A0A1W2PP80 73 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 PTPRAP18433 802 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 FCGRTP55899 365 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 KIAA0319Q5VV43 1072 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 DZIP1LQ8IYY4 767 aaKnown RBP5.33□□□□□ -1.56
RFC1-209ENST00000504974 NXPE3Q969Y0 559 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 FRMD6Q96NE9 622 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 ADAM19Q9H013 955 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 C12orf49Q9H741 205 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 KIAA1522Q9P206 1035 aaPredicted RBP5.33□□□□□ -1.56
RFC1-209ENST00000504974 TRAK1Q9UPV9 953 aa5.33□□□□□ -1.56
RFC1-209ENST00000504974 SOX1O00570 391 aaPredicted RBP5.32□□□□□ -1.56
RFC1-209ENST00000504974 H2AFB1P0C5Y9 115 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 H2AFB2P0C5Z0 115 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 ITGAEP38570 1179 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 DUOXA2Q1HG44 320 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 DTHD1Q6ZMT9 781 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 VN1R5Q7Z5H4 357 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 TMEM130Q8N3G9 435 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms