RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 MYSM1Q5VVJ2 828 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 PLEKHG4BQ96PX9 1271 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 PNKPQ96T60 521 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 ABCC4O15439 1325 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
SMTN-221ENST00000504335 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
SMTN-221ENST00000504335 ARMC3Q5W041 872 aa15.52■□□□□ 0.08
SMTN-221ENST00000504335 PARP9Q8IXQ6 854 aa15.52■□□□□ 0.08
SMTN-221ENST00000504335 DHX58Q96C10 678 aa15.52■□□□□ 0.08
SMTN-221ENST00000504335 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
SMTN-221ENST00000504335 SLC30A9Q6PML9 568 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 KIFC2Q96AC6 838 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 PAGR1Q9BTK6 254 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 CAPS2Q9BXY5 557 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 SUGCTQ9HAC7 445 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 RGL1Q9NZL6 768 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.07
SMTN-221ENST00000504335 EVC2Q86UK5 1308 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 KDRP35968 1356 aa15.52■□□□□ 0.07
SMTN-221ENST00000504335 LRRIQ3A6PVS8 624 aaPredicted RBP15.51■□□□□ 0.07
SMTN-221ENST00000504335 SLMAPQ14BN4 828 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 TTC14Q96N46 770 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 WDR24Q96S15 920 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 CENPHQ9H3R5 247 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 GOLGA6L7A0A1B0GV03 622 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 IFFO1Q0D2I5 559 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 PPP2R2CQ9Y2T4 447 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
SMTN-221ENST00000504335 ZSCAN9O15535 394 aaPredicted RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 ARHGAP6O43182 974 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 PDCP20941 246 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 HSPA4P34932 840 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 RPAP2Q8IXW5 612 aaPredicted RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 MAF1Q9H063 256 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 SLC40A1Q9NP59 571 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 ERICH2A1L162 156 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 AOPEPQ8N6M6 819 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 ANKRD44Q8N8A2 993 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 B4GALNT2Q8NHY0 566 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 NUP133Q8WUM0 1156 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 LEO1Q8WVC0 666 aaPredicted RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
SMTN-221ENST00000504335 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
SMTN-221ENST00000504335 AK2P54819 239 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
SMTN-221ENST00000504335 SDCCAG8Q86SQ7 713 aaPredicted RBP15.49■□□□□ 0.07
SMTN-221ENST00000504335 TMTC2Q8N394 836 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
SMTN-221ENST00000504335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMTN-221ENST00000504335 MCM3P25205 808 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 VSNL1P62760 191 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 WDR93Q6P2C0 686 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 KIRREL3Q8IZU9 778 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 FAM177A1Q8N128 213 aaPredicted RBP15.49■□□□□ 0.07
SMTN-221ENST00000504335 ZNF396Q96N95 335 aaPredicted RBP15.49■□□□□ 0.07
SMTN-221ENST00000504335 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
SMTN-221ENST00000504335 PYGBP11216 843 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 IBSPP21815 317 aaPredicted RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 RUFY3Q7L099 469 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 MYLK4Q86YV6 388 aaPredicted RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 FAM81AQ8TBF8 368 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 CDC23Q9UJX2 597 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 GGA2Q9UJY4 613 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 CORO1CQ9ULV4 474 aaPredicted RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 CEP152O94986 1710 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 NDUFAB1O14561 156 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 ROR2Q01974 943 aaKnown RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 TMEM132AQ24JP5 1023 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 THEMIS2Q5TEJ8 643 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 CCDC181Q5TID7 509 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 CCDC13Q8IYE1 715 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 CCDC47Q96A33 483 aaKnown RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 ACTR5Q9H9F9 607 aaPredicted RBP15.48■□□□□ 0.07
SMTN-221ENST00000504335 GOLGA6AQ9NYA3 693 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 TRIM35Q9UPQ4 493 aa15.48■□□□□ 0.07
SMTN-221ENST00000504335 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 PDE1AP54750 535 aa15.47■□□□□ 0.07
SMTN-221ENST00000504335 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMTN-221ENST00000504335 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
SMTN-221ENST00000504335 LIN7AO14910 233 aaPredicted RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 RPSAP08865 295 aaKnown RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 NBPF7P0C2Y1 421 aaPredicted RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 CYB5D1Q6P9G0 228 aa15.47■□□□□ 0.07
SMTN-221ENST00000504335 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 TRIM58Q8NG06 486 aa15.47■□□□□ 0.07
SMTN-221ENST00000504335 CCDC12Q8WUD4 166 aaPredicted RBP15.47■□□□□ 0.07
SMTN-221ENST00000504335 TBC1D5Q92609 795 aa15.47■□□□□ 0.07
SMTN-221ENST00000504335 ALS2CR12Q96Q35 445 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms