RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 IL2RBP14784 551 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 MSX1P28360 303 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 SRPK2P78362 688 aaKnown RBP7.18□□□□□ -1.26
OTUD4-204ENST00000504331 NUTM2GQ5VZR2 741 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 PGBD3Q8N328 593 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 PDGFDQ9GZP0 370 aaPredicted RBP7.18□□□□□ -1.26
OTUD4-204ENST00000504331 OSBPL3Q9H4L5 887 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
OTUD4-204ENST00000504331 TFCP2L1Q9NZI6 479 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 COL24A1Q17RW2 1714 aa7.18□□□□□ -1.26
OTUD4-204ENST00000504331 TRAK2O60296 914 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 TOMM70O94826 608 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 ADH6P28332 368 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
OTUD4-204ENST00000504331 EFHC2Q5JST6 749 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 KRTAP4-2Q9BYR5 136 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 POLR3EQ9NVU0 708 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 TNS2Q63HR2 1409 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 SLIT3O75094 1523 aa7.17□□□□□ -1.26
OTUD4-204ENST00000504331 LRRC37A3O60309 1634 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 IL2RAP01589 272 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 CENPCQ03188 943 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 C4orf17Q53FE4 359 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 HMX1Q9NP08 348 aaPredicted RBP7.16□□□□□ -1.26
OTUD4-204ENST00000504331 CGNL1Q0VF96 1302 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 EVC2Q86UK5 1308 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 PPIP5K1Q6PFW1 1433 aa7.16□□□□□ -1.26
OTUD4-204ENST00000504331 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
OTUD4-204ENST00000504331 ESYT1Q9BSJ8 1104 aa7.15□□□□□ -1.26
OTUD4-204ENST00000504331 RSPH6AQ9H0K4 717 aa7.15□□□□□ -1.26
OTUD4-204ENST00000504331 CRISPLD1Q9H336 500 aa7.15□□□□□ -1.26
OTUD4-204ENST00000504331 HRH3Q9Y5N1 445 aa7.15□□□□□ -1.26
OTUD4-204ENST00000504331 CENPJQ9HC77 1338 aaPredicted RBP7.15□□□□□ -1.26
OTUD4-204ENST00000504331 CPSF1Q10570 1443 aaKnown RBP7.15□□□□□ -1.27
OTUD4-204ENST00000504331 NSD3Q9BZ95 1437 aa7.15□□□□□ -1.27
OTUD4-204ENST00000504331 NHSQ6T4R5 1651 aa7.15□□□□□ -1.27
OTUD4-204ENST00000504331 TOPAZ1Q8N9V7 1692 aa7.15□□□□□ -1.27
OTUD4-204ENST00000504331 KIAA1210Q9ULL0 1709 aa7.15□□□□□ -1.27
OTUD4-204ENST00000504331 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 H2AFB2P0C5Z0 115 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 COL18A1P39060 1754 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 UTRNP46939 3433 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 PRELPP51888 382 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 FSTL1Q12841 308 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 TRPM1Q7Z4N2 1603 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 CNKSR1Q969H4 720 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 SHANK3Q9BYB0 1731 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 ATP10DQ9P241 1426 aa7.14□□□□□ -1.27
OTUD4-204ENST00000504331 ARHGEF28Q8N1W1 1705 aaKnown RBP7.13□□□□□ -1.27
OTUD4-204ENST00000504331 ADCY9O60503 1353 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 PNPLA7Q6ZV29 1317 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 TTC21BQ7Z4L5 1316 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 NEUROD2Q15784 382 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 PRRT3Q5FWE3 981 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 JMYQ8N9B5 988 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
OTUD4-204ENST00000504331 WNK3Q9BYP7 1800 aa7.13□□□□□ -1.27
OTUD4-204ENST00000504331 PAPPAQ13219 1627 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 USP31Q70CQ4 1352 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
OTUD4-204ENST00000504331 COL9A3Q14050 684 aaPredicted RBP7.12□□□□□ -1.27
OTUD4-204ENST00000504331 PTF1AQ7RTS3 328 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
OTUD4-204ENST00000504331 FMNL2Q96PY5 1086 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 PUS7Q96PZ0 661 aaKnown RBP7.12□□□□□ -1.27
OTUD4-204ENST00000504331 ZMYND15Q9H091 742 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 AVENQ9NQS1 362 aaPredicted RBP7.12□□□□□ -1.27
OTUD4-204ENST00000504331 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
OTUD4-204ENST00000504331 ANKRD36BQ8N2N9 1353 aa7.11□□□□□ -1.27
OTUD4-204ENST00000504331 TGFB2P61812 414 aa7.11□□□□□ -1.27
OTUD4-204ENST00000504331 ZNF827Q17R98 1081 aa7.11□□□□□ -1.27
OTUD4-204ENST00000504331 C16orf71Q8IYS4 520 aaPredicted RBP7.11□□□□□ -1.27
OTUD4-204ENST00000504331 ZC3H15Q8WU90 426 aaKnown RBP7.11□□□□□ -1.27
OTUD4-204ENST00000504331 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
OTUD4-204ENST00000504331 ZCCHC2Q9C0B9 1178 aaKnown RBP7.11□□□□□ -1.27
OTUD4-204ENST00000504331 PCDHGC4Q9Y5F7 938 aa7.11□□□□□ -1.27
OTUD4-204ENST00000504331 USP47Q96K76 1375 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 CD33P20138 364 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 PCBP4P57723 403 aaKnown RBP7.1□□□□□ -1.27
OTUD4-204ENST00000504331 NLGN2Q8NFZ4 835 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 MDFIQ99750 246 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 CCNL1Q9UK58 526 aaPredicted RBP7.1□□□□□ -1.27
OTUD4-204ENST00000504331 PCDHB9Q9Y5E1 797 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 BTAF1O14981 1849 aa7.1□□□□□ -1.27
OTUD4-204ENST00000504331 PLEKHG2Q9H7P9 1386 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 SPDYE3A6NKU9 549 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 PAX4O43316 350 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 GRIK4Q16099 956 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 GNASQ5JWF2 1037 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
OTUD4-204ENST00000504331 KDM2BQ8NHM5 1336 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 DCDC2BA2VCK2 349 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 GNRH1P01148 92 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 PDIA4P13667 645 aaKnown RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 SSFA2P28290 1259 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 TXKP42681 527 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms