RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 CYP21A2P08686 494 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 SLC5A1P13866 664 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 ME3Q16798 604 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 LLPHQ9BRT6 129 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 MAST3O60307 1309 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 IGSF3O75054 1194 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 SYT1P21579 422 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 ADORA1P30542 326 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 ZNF445P59923 1031 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 DDR1Q08345 913 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 R3HDM1Q15032 1099 aaKnown RBP11.32□□□□□ -0.6
KLHL3-204ENST00000504208 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
KLHL3-204ENST00000504208 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 SEC62Q99442 399 aaKnown RBP11.32□□□□□ -0.6
KLHL3-204ENST00000504208 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
KLHL3-204ENST00000504208 COL4A1P02462 1669 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 POLRMTO00411 1230 aaKnown RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 NPHP1O15259 732 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 ZAP70P43403 619 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
KLHL3-204ENST00000504208 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
KLHL3-204ENST00000504208 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-204ENST00000504208 MMP10P09238 476 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 CPA1P15085 419 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 GJB2P29033 226 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 TM4SF1P30408 202 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 ADD2P35612 726 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 MCAMP43121 646 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 EVCP57679 992 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
KLHL3-204ENST00000504208 ERFEQ4G0M1 354 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 CCDC83Q8IWF9 413 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-204ENST00000504208 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-204ENST00000504208 KIF3AQ9Y496 699 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 LRRC37AA6NMS7 1700 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 BRCA1P38398 1863 aaKnown RBP11.3□□□□□ -0.6
KLHL3-204ENST00000504208 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
KLHL3-204ENST00000504208 F13A1P00488 732 aa11.29□□□□□ -0.6
KLHL3-204ENST00000504208 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-204ENST00000504208 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-204ENST00000504208 ALX1Q15699 326 aa11.29□□□□□ -0.6
KLHL3-204ENST00000504208 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
KLHL3-204ENST00000504208 ZNF274Q96GC6 653 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-204ENST00000504208 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
KLHL3-204ENST00000504208 E7EWF7 191 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 PFKFB2O60825 505 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 LARGE1O95461 756 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 SERPINB2P05120 415 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 ST5P78524 1137 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
KLHL3-204ENST00000504208 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 SCARF1Q14162 830 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 WASHC4Q2M389 1173 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 GTF3C6Q969F1 213 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
KLHL3-204ENST00000504208 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
KLHL3-204ENST00000504208 MTMR6Q9Y217 621 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 M0R2C6 588 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 MAP3K12Q12852 859 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 LARP1BQ659C4 914 aaKnown RBP11.28□□□□□ -0.6
KLHL3-204ENST00000504208 Q6ZUG5 572 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 SPATA5Q8NB90 893 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
KLHL3-204ENST00000504208 SRCAPQ6ZRS2 3230 aa11.27□□□□□ -0.6
KLHL3-204ENST00000504208 GPAA1O43292 621 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
KLHL3-204ENST00000504208 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.61
KLHL3-204ENST00000504208 GNAT2P19087 354 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 ANKRD18AQ8IVF6 992 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
KLHL3-204ENST00000504208 TAF6LQ9Y6J9 622 aa11.27□□□□□ -0.61
KLHL3-204ENST00000504208 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms