RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ACTR5Q9H9F9 607 aaPredicted RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 KLC4Q9NSK0 619 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 DACT1Q9NYF0 836 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 FANCD2Q9BXW9 1451 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 ABCA6Q8N139 1617 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 MADDQ8WXG6 1647 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 BECN2A8MW95 431 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 MEFVO15553 781 aaPredicted RBP6.83□□□□□ -1.32
LINC01340-201ENST00000504012 ARHGAP6O43182 974 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 FESP07332 822 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 TMPOP42166 694 aaKnown RBP6.83□□□□□ -1.32
LINC01340-201ENST00000504012 IRAK1P51617 712 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 MCM6Q14566 821 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 CASP8Q14790 479 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 ARID5BQ14865 1188 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 TBC1D25Q3MII6 688 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC38Q502W7 563 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 EMC10Q5UCC4 262 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 FBXW10Q5XX13 1052 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 TTC6Q86TZ1 520 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 MFN1Q8IWA4 741 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC170Q8IYT3 715 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 CEP57L1Q8IYX8 460 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 ZFAND2BQ8WV99 257 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
LINC01340-201ENST00000504012 PLEKHF1Q96S99 279 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 LARP6Q9BRS8 491 aaKnown RBP6.83□□□□□ -1.32
LINC01340-201ENST00000504012 DNAJC25Q9H1X3 360 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 ALDH8A1Q9H2A2 487 aaPredicted RBP6.83□□□□□ -1.32
LINC01340-201ENST00000504012 FAM204AQ9H8W3 233 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 IRAK4Q9NWZ3 460 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 STAP2Q9UGK3 403 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 TRIM35Q9UPQ4 493 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 USP16Q9Y5T5 823 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 NRXN1Q9ULB1 1477 aa6.83□□□□□ -1.32
LINC01340-201ENST00000504012 HECW2Q9P2P5 1572 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CDHR2Q9BYE9 1310 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CBFA2T2O43439 604 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ZMYND10O75800 440 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 GABBR2O75899 941 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 RTN3O95197 1032 aaPredicted RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ATP5JP18859 108 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CLNS1AP54105 237 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 SKOR1P84550 965 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ACTN3Q08043 901 aaPredicted RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 KCNA1Q09470 495 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 G3BP1Q13283 466 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CDC37Q16543 378 aaPredicted RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 TSHZ1Q6ZSZ6 1077 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 DHX40Q8IX18 779 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 NME8Q8N427 588 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 C3orf20Q8ND61 904 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 OR8K1Q8NGG5 319 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 RUBCNQ92622 972 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 P3H4Q92791 437 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 RSRC1Q96IZ7 334 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ANKRD27Q96NW4 1050 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 TSPAN18Q96SJ8 248 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CRACR2AQ9BSW2 395 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 MOV10L1Q9BXT6 1211 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 BICC1Q9H694 974 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CORO1CQ9ULV4 474 aaPredicted RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
LINC01340-201ENST00000504012 CAPN7Q9Y6W3 813 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 ABCA9Q8IUA7 1624 aa6.82□□□□□ -1.32
LINC01340-201ENST00000504012 IQGAP3Q86VI3 1631 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 GOLGA6L7A0A1B0GV03 622 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 ERICH2A1L162 156 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 EIF3HO15372 352 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CUTAO60888 179 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 RNF40O75150 1001 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CAND2O75155 1236 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 HMMRO75330 724 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 GCKP35557 465 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 RAB27AP51159 221 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CDR1P51861 262 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 PDE1AP54750 535 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CHMP4BP1P59074 171 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 GNL2Q13823 731 aaKnown RBP6.81□□□□□ -1.32
LINC01340-201ENST00000504012 SNCBQ16143 134 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 WHAMMP3Q1A5X7 153 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 AMOTQ4VCS5 1084 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CEP85LQ5SZL2 805 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 TRIM74Q86UV6 250 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 TRIM73Q86UV7 250 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 NCAPG2Q86XI2 1143 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 FAM76AQ8TAV0 307 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 LEO1Q8WVC0 666 aaPredicted RBP6.81□□□□□ -1.32
LINC01340-201ENST00000504012 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 SH3GL2Q99962 352 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 VCPKMTQ9H867 229 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 CDC23Q9UJX2 597 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms