RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 H7C1W4 665 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 GJA5P36382 358 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDR1-250ENST00000503628 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 UBE3BQ7Z3V4 1068 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 BRCA2P51587 3418 aa20.23■□□□□ 0.83
DDR1-250ENST00000503628 UNCXA6NJT0 531 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 ITGA6P23229 1130 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 KCNJ4P48050 445 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 CAP1Q01518 475 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 NBPF12Q5TAG4 269 aaPredicted RBP20.22■□□□□ 0.83
DDR1-250ENST00000503628 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 TSPYL6Q8N831 410 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 MTMR14Q8NCE2 650 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 PTPN18Q99952 460 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 PPP2R3BQ9Y5P8 575 aa20.22■□□□□ 0.83
DDR1-250ENST00000503628 CLRN2A0PK11 232 aa20.21■□□□□ 0.83
DDR1-250ENST00000503628 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
DDR1-250ENST00000503628 SNAP23O00161 211 aa20.21■□□□□ 0.83
DDR1-250ENST00000503628 APAF1O14727 1248 aa20.21■□□□□ 0.83
DDR1-250ENST00000503628 USP2O75604 605 aaPredicted RBP20.21■□□□□ 0.83
DDR1-250ENST00000503628 SP3Q02447 781 aa20.21■□□□□ 0.83
DDR1-250ENST00000503628 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
DDR1-250ENST00000503628 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
DDR1-250ENST00000503628 IREB2P48200 963 aaKnown RBP20.2■□□□□ 0.82
DDR1-250ENST00000503628 CHRNDQ07001 517 aa20.2■□□□□ 0.82
DDR1-250ENST00000503628 CFAP100Q494V2 611 aa20.2■□□□□ 0.82
DDR1-250ENST00000503628 PRMT6Q96LA8 375 aaPredicted RBP20.2■□□□□ 0.82
DDR1-250ENST00000503628 MYO1BO43795 1136 aa20.19■□□□□ 0.82
DDR1-250ENST00000503628 TMEM106CQ9BVX2 250 aa20.19■□□□□ 0.82
DDR1-250ENST00000503628 VEZTQ9HBM0 779 aa20.19■□□□□ 0.82
DDR1-250ENST00000503628 AOX1Q06278 1338 aa20.19■□□□□ 0.82
DDR1-250ENST00000503628 TESPA1A2RU30 521 aaPredicted RBP20.18■□□□□ 0.82
DDR1-250ENST00000503628 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 CSF1RP07333 972 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 ANKRD13AQ8IZ07 590 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 COLQQ9Y215 455 aaPredicted RBP20.18■□□□□ 0.82
DDR1-250ENST00000503628 IRS2Q9Y4H2 1338 aa20.18■□□□□ 0.82
DDR1-250ENST00000503628 TAF5LO75529 589 aa20.17■□□□□ 0.82
DDR1-250ENST00000503628 RASA3Q14644 834 aa20.17■□□□□ 0.82
DDR1-250ENST00000503628 G2E3Q7L622 706 aa20.17■□□□□ 0.82
DDR1-250ENST00000503628 HELBQ8NG08 1087 aaPredicted RBP20.17■□□□□ 0.82
DDR1-250ENST00000503628 CASP7P55210 303 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 GCKRQ14397 625 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 ZNF333Q96JL9 665 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 JAG2Q9Y219 1238 aa20.16■□□□□ 0.82
DDR1-250ENST00000503628 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
DDR1-250ENST00000503628 IL1R1P14778 569 aa20.15■□□□□ 0.82
DDR1-250ENST00000503628 RBM5P52756 815 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDR1-250ENST00000503628 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
DDR1-250ENST00000503628 OPTNQ96CV9 577 aa20.15■□□□□ 0.82
DDR1-250ENST00000503628 MS4A4AQ96JQ5 239 aa20.15■□□□□ 0.82
DDR1-250ENST00000503628 OTOFQ9HC10 1997 aa20.14■□□□□ 0.81
DDR1-250ENST00000503628 SLC9C1Q4G0N8 1177 aa20.14■□□□□ 0.81
DDR1-250ENST00000503628 NBPF11Q86T75 865 aa20.14■□□□□ 0.81
DDR1-250ENST00000503628 PTCH2Q9Y6C5 1203 aa20.14■□□□□ 0.81
DDR1-250ENST00000503628 ANKRD18BA2A2Z9 1011 aa20.13■□□□□ 0.81
DDR1-250ENST00000503628 FKBP1AP62942 108 aaKnown RBP20.13■□□□□ 0.81
DDR1-250ENST00000503628 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
DDR1-250ENST00000503628 ZNF804AQ7Z570 1209 aa20.13■□□□□ 0.81
DDR1-250ENST00000503628 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
DDR1-250ENST00000503628 CEP290O15078 2479 aa20.13■□□□□ 0.81
DDR1-250ENST00000503628 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
DDR1-250ENST00000503628 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
DDR1-250ENST00000503628 ARHGEF6Q15052 776 aa20.12■□□□□ 0.81
DDR1-250ENST00000503628 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
DDR1-250ENST00000503628 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
DDR1-250ENST00000503628 BRI3BPQ8WY22 251 aa20.12■□□□□ 0.81
DDR1-250ENST00000503628 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
DDR1-250ENST00000503628 TAF1CQ15572 869 aaPredicted RBP20.11■□□□□ 0.81
DDR1-250ENST00000503628 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
DDR1-250ENST00000503628 MIER1Q8N108 512 aa20.11■□□□□ 0.81
DDR1-250ENST00000503628 ZFYVE28Q9HCC9 887 aa20.11■□□□□ 0.81
DDR1-250ENST00000503628 ZNF70Q9UC06 446 aaPredicted RBP20.11■□□□□ 0.81
DDR1-250ENST00000503628 CCL15-CCL14A0A0B4J2E2 113 aa20.1■□□□□ 0.81
DDR1-250ENST00000503628 CCL15Q16663 113 aa20.1■□□□□ 0.81
DDR1-250ENST00000503628 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
DDR1-250ENST00000503628 TDRD3Q9H7E2 651 aaKnown RBP20.1■□□□□ 0.81
DDR1-250ENST00000503628 H0YGN5 161 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 IFIT5Q13325 482 aaKnown RBP20.09■□□□□ 0.81
DDR1-250ENST00000503628 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 FAM43AQ8N2R8 423 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 TEPSINQ96N21 525 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 TRIOBPQ9H2D6 2365 aa20.09■□□□□ 0.81
DDR1-250ENST00000503628 PLIN1O60240 522 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 GTF2A2P52657 109 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 MAP3K9P80192 1104 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 FOXO4P98177 505 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 FLIIQ13045 1269 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms