RNA–Protein interactions for RNA: ENST00000503509.1

SERF1A-203, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2

Gene SERF1A, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-203ENST00000503509 NPHS2Q9NP85 383 aa8.46□□□□□ -1.06
SERF1A-203ENST00000503509 H3BRJ5 948 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 NOS3P29474 1203 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 GRIA4P48058 902 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 NKAPLQ5M9Q1 402 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
SERF1A-203ENST00000503509 SOX1O00570 391 aaPredicted RBP8.44□□□□□ -1.06
SERF1A-203ENST00000503509 DDX3YO15523 660 aaKnown RBP8.44□□□□□ -1.06
SERF1A-203ENST00000503509 ADAM11O75078 769 aa8.44□□□□□ -1.06
SERF1A-203ENST00000503509 ALX3O95076 343 aa8.44□□□□□ -1.06
SERF1A-203ENST00000503509 WISP1O95388 367 aa8.44□□□□□ -1.06
SERF1A-203ENST00000503509 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
SERF1A-203ENST00000503509 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
SERF1A-203ENST00000503509 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
SERF1A-203ENST00000503509 LIN7BQ9HAP6 207 aa8.44□□□□□ -1.06
SERF1A-203ENST00000503509 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
SERF1A-203ENST00000503509 ITGB7P26010 798 aa8.43□□□□□ -1.06
SERF1A-203ENST00000503509 CD68P34810 354 aaPredicted RBP8.43□□□□□ -1.06
SERF1A-203ENST00000503509 TMEM130Q8N3G9 435 aa8.43□□□□□ -1.06
SERF1A-203ENST00000503509 EPS8L3Q8TE67 593 aaKnown RBP8.43□□□□□ -1.06
SERF1A-203ENST00000503509 FOXD4L4Q8WXT5 416 aaPredicted RBP8.43□□□□□ -1.06
SERF1A-203ENST00000503509 SEC31BQ9NQW1 1179 aa8.43□□□□□ -1.06
SERF1A-203ENST00000503509 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 F8W735 103 aaPredicted RBP8.42□□□□□ -1.06
SERF1A-203ENST00000503509 PIP4K2BP78356 416 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 FAM117BQ6P1L5 589 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 KLHL23Q8NBE8 558 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 TP53INP1Q96A56 240 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 ASB16Q96NS5 453 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 AKTIPQ9H8T0 292 aa8.42□□□□□ -1.06
SERF1A-203ENST00000503509 A0A096LPE4 126 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 DYRK3O43781 588 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 CABP4P57796 275 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
SERF1A-203ENST00000503509 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 WNT8BQ93098 351 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 OSGEPQ9NPF4 335 aa8.41□□□□□ -1.06
SERF1A-203ENST00000503509 ESRRAP11474 423 aaPredicted RBP8.4□□□□□ -1.06
SERF1A-203ENST00000503509 FMR1Q06787 632 aaKnown RBP eCLIP8.4□□□□□ -1.06
SERF1A-203ENST00000503509 IKBKEQ14164 716 aa8.4□□□□□ -1.06
SERF1A-203ENST00000503509 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
SERF1A-203ENST00000503509 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
SERF1A-203ENST00000503509 SND1Q7KZF4 910 aaKnown RBP eCLIP8.4□□□□□ -1.06
SERF1A-203ENST00000503509 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.4□□□□□ -1.06
SERF1A-203ENST00000503509 SETDB2Q96T68 719 aa8.4□□□□□ -1.06
SERF1A-203ENST00000503509 KRTAP4-7Q9BYR0 210 aa8.4□□□□□ -1.06
SERF1A-203ENST00000503509 EHD4Q9H223 541 aa8.4□□□□□ -1.06
SERF1A-203ENST00000503509 PNMA6FA0A0J9YX94 578 aa8.39□□□□□ -1.07
SERF1A-203ENST00000503509 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
SERF1A-203ENST00000503509 ZSCAN29Q8IWY8 852 aaPredicted RBP8.39□□□□□ -1.07
SERF1A-203ENST00000503509 UBASH3BQ8TF42 649 aa8.39□□□□□ -1.07
SERF1A-203ENST00000503509 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
SERF1A-203ENST00000503509 H2AFB1P0C5Y9 115 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 H2AFB2P0C5Z0 115 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 GRM2Q14416 872 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 Q6ZS46 218 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 DZIP1LQ8IYY4 767 aaKnown RBP8.38□□□□□ -1.07
SERF1A-203ENST00000503509 WWC3Q9ULE0 1092 aa8.38□□□□□ -1.07
SERF1A-203ENST00000503509 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
SERF1A-203ENST00000503509 ITPKAP23677 461 aa8.37□□□□□ -1.07
SERF1A-203ENST00000503509 NLRP12P59046 1061 aa8.37□□□□□ -1.07
SERF1A-203ENST00000503509 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
SERF1A-203ENST00000503509 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
SERF1A-203ENST00000503509 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
SERF1A-203ENST00000503509 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
SERF1A-203ENST00000503509 GLB1P16278 677 aa8.36□□□□□ -1.07
SERF1A-203ENST00000503509 MAPK8P45983 427 aa8.36□□□□□ -1.07
SERF1A-203ENST00000503509 PCDH1Q08174 1060 aa8.36□□□□□ -1.07
SERF1A-203ENST00000503509 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
SERF1A-203ENST00000503509 UBL7Q96S82 380 aaPredicted RBP8.36□□□□□ -1.07
SERF1A-203ENST00000503509 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
SERF1A-203ENST00000503509 ZNF576Q9H609 170 aa8.36□□□□□ -1.07
SERF1A-203ENST00000503509 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
SERF1A-203ENST00000503509 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
SERF1A-203ENST00000503509 DLGAP3O95886 979 aa8.35□□□□□ -1.07
SERF1A-203ENST00000503509 P4HBP07237 508 aaKnown RBP8.35□□□□□ -1.07
SERF1A-203ENST00000503509 ARL4DP49703 201 aa8.34□□□□□ -1.07
SERF1A-203ENST00000503509 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
SERF1A-203ENST00000503509 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
SERF1A-203ENST00000503509 GSTM4Q03013 218 aa8.33□□□□□ -1.08
SERF1A-203ENST00000503509 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
SERF1A-203ENST00000503509 FAAP100Q0VG06 881 aa8.33□□□□□ -1.08
SERF1A-203ENST00000503509 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
SERF1A-203ENST00000503509 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
SERF1A-203ENST00000503509 LOC100289279A0A1B0GTE1 492 aa8.32□□□□□ -1.08
SERF1A-203ENST00000503509 B3GALT4O96024 378 aa8.32□□□□□ -1.08
SERF1A-203ENST00000503509 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
SERF1A-203ENST00000503509 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
SERF1A-203ENST00000503509 TRAK1Q9UPV9 953 aa8.32□□□□□ -1.08
SERF1A-203ENST00000503509 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
SERF1A-203ENST00000503509 CTSBP07858 339 aa8.31□□□□□ -1.08
SERF1A-203ENST00000503509 FCGRTP55899 365 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms