RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 SUZ12Q15022 739 aaKnown RBP8□□□□□ -1.13
CPNE4-203ENST00000503204 FOXD4L6Q3SYB3 417 aaPredicted RBP8□□□□□ -1.13
CPNE4-203ENST00000503204 FOXD4L3Q6VB84 417 aaPredicted RBP8□□□□□ -1.13
CPNE4-203ENST00000503204 ASB16Q96NS5 453 aa8□□□□□ -1.13
CPNE4-203ENST00000503204 TCF12Q99081 682 aa8□□□□□ -1.13
CPNE4-203ENST00000503204 EHD4Q9H223 541 aa8□□□□□ -1.13
CPNE4-203ENST00000503204 ZBTB7CA1YPR0 619 aa7.99□□□□□ -1.13
CPNE4-203ENST00000503204 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-203ENST00000503204 EIF4EBP3O60516 100 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-203ENST00000503204 IREB2P48200 963 aaKnown RBP7.99□□□□□ -1.13
CPNE4-203ENST00000503204 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
CPNE4-203ENST00000503204 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.99□□□□□ -1.13
CPNE4-203ENST00000503204 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
CPNE4-203ENST00000503204 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
CPNE4-203ENST00000503204 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-203ENST00000503204 A0A096LPE4 126 aa7.98□□□□□ -1.13
CPNE4-203ENST00000503204 A0A1W2PPZ6 126 aa7.98□□□□□ -1.13
CPNE4-203ENST00000503204 METTL12A8MUP2 240 aa7.98□□□□□ -1.13
CPNE4-203ENST00000503204 K7ELQ4 463 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-203ENST00000503204 FURINP09958 794 aa7.98□□□□□ -1.13
CPNE4-203ENST00000503204 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-203ENST00000503204 TRAK1Q9UPV9 953 aa7.98□□□□□ -1.13
CPNE4-203ENST00000503204 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 ADAM23O75077 832 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 GADD45BO75293 160 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 ESRRAP11474 423 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 GRIA4P48058 902 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 DUOXA2Q1HG44 320 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 Q6ZS46 218 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 ACAD11Q709F0 780 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 SND1Q7KZF4 910 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-203ENST00000503204 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
CPNE4-203ENST00000503204 PNMA6FA0A0J9YX94 578 aa7.96□□□□□ -1.14
CPNE4-203ENST00000503204 ADAM11O75078 769 aa7.96□□□□□ -1.14
CPNE4-203ENST00000503204 WISP1O95388 367 aa7.96□□□□□ -1.14
CPNE4-203ENST00000503204 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
CPNE4-203ENST00000503204 ENOX2Q16206 610 aaKnown RBP7.96□□□□□ -1.14
CPNE4-203ENST00000503204 RSPO4Q2I0M5 234 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-203ENST00000503204 NKAPLQ5M9Q1 402 aa7.96□□□□□ -1.14
CPNE4-203ENST00000503204 NLRP2Q9NX02 1062 aa7.96□□□□□ -1.14
CPNE4-203ENST00000503204 DDX3YO15523 660 aaKnown RBP7.95□□□□□ -1.14
CPNE4-203ENST00000503204 ALX3O95076 343 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 ITPKAP23677 461 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 NLRP12P59046 1061 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
CPNE4-203ENST00000503204 SPRED3Q2MJR0 410 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 DZIP1LQ8IYY4 767 aaKnown RBP7.95□□□□□ -1.14
CPNE4-203ENST00000503204 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
CPNE4-203ENST00000503204 TP53INP1Q96A56 240 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 MEGF10Q96KG7 1140 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 CEP41Q9BYV8 373 aa7.95□□□□□ -1.14
CPNE4-203ENST00000503204 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 GRM2Q14416 872 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 HGSNATQ68CP4 663 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 KIAA1211Q6ZU35 1233 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
CPNE4-203ENST00000503204 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 UBASH3BQ8TF42 649 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 ABCB6Q9NP58 842 aa7.94□□□□□ -1.14
CPNE4-203ENST00000503204 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 GLB1P16278 677 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 MAPK8P45983 427 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 ZNF576Q9H609 170 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 PPP4R2Q9NY27 417 aa7.93□□□□□ -1.14
CPNE4-203ENST00000503204 DYRK3O43781 588 aa7.92□□□□□ -1.14
CPNE4-203ENST00000503204 RPS26P11Q5JNZ5 115 aaPredicted RBP7.92□□□□□ -1.14
CPNE4-203ENST00000503204 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
CPNE4-203ENST00000503204 GLIS3Q8NEA6 775 aa7.92□□□□□ -1.14
CPNE4-203ENST00000503204 DDX54Q8TDD1 881 aaKnown RBP7.92□□□□□ -1.14
CPNE4-203ENST00000503204 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
CPNE4-203ENST00000503204 ZFYVE1Q9HBF4 777 aa7.92□□□□□ -1.14
CPNE4-203ENST00000503204 B3GALT4O96024 378 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 ATP2B2Q01814 1243 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 GSTM4Q03013 218 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 ZNF423Q2M1K9 1284 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 UVSSAQ2YD98 709 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 ANKRD34AQ69YU3 496 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 RUSC1Q9BVN2 902 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 USP26Q9BXU7 913 aa7.91□□□□□ -1.14
CPNE4-203ENST00000503204 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
CPNE4-203ENST00000503204 XRCC5P13010 732 aaKnown RBP7.9□□□□□ -1.14
CPNE4-203ENST00000503204 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
CPNE4-203ENST00000503204 PI16Q6UXB8 463 aa7.9□□□□□ -1.14
CPNE4-203ENST00000503204 BCO2Q9BYV7 579 aa7.9□□□□□ -1.14
CPNE4-203ENST00000503204 LOC100289279A0A1B0GTE1 492 aa7.89□□□□□ -1.15
CPNE4-203ENST00000503204 CYP11A1P05108 521 aa7.89□□□□□ -1.15
CPNE4-203ENST00000503204 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
CPNE4-203ENST00000503204 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
CPNE4-203ENST00000503204 UBL7Q96S82 380 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-203ENST00000503204 NRSN2Q9GZP1 204 aa7.89□□□□□ -1.15
CPNE4-203ENST00000503204 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
CPNE4-203ENST00000503204 FCGRTP55899 365 aa7.88□□□□□ -1.15
CPNE4-203ENST00000503204 HP1BP3Q5SSJ5 553 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-203ENST00000503204 FDX2Q6P4F2 183 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms