RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PNPLA7Q6ZV29 1317 aa26.25■■□□□ 1.79
PTPN13-205ENST00000502971 IDH1O75874 414 aaKnown RBP26.25■■□□□ 1.79
PTPN13-205ENST00000502971 CYP21A2P08686 494 aa26.25■■□□□ 1.79
PTPN13-205ENST00000502971 RPS6KB1P23443 525 aa26.25■■□□□ 1.79
PTPN13-205ENST00000502971 TNPO1Q92973 898 aaKnown RBP26.25■■□□□ 1.79
PTPN13-205ENST00000502971 QSER1Q2KHR3 1735 aa26.24■■□□□ 1.79
PTPN13-205ENST00000502971 SERPINB2P05120 415 aa26.24■■□□□ 1.79
PTPN13-205ENST00000502971 ST5P78524 1137 aa26.24■■□□□ 1.79
PTPN13-205ENST00000502971 ANKRD1Q15327 319 aa26.24■■□□□ 1.79
PTPN13-205ENST00000502971 PUS7LQ9H0K6 701 aaKnown RBP26.24■■□□□ 1.79
PTPN13-205ENST00000502971 CTNNA3Q9UI47 895 aa26.24■■□□□ 1.79
PTPN13-205ENST00000502971 MAP3K12Q12852 859 aa26.23■■□□□ 1.79
PTPN13-205ENST00000502971 CAVIN4Q5BKX8 364 aa26.23■■□□□ 1.79
PTPN13-205ENST00000502971 NLGN1Q8N2Q7 840 aa26.23■■□□□ 1.79
PTPN13-205ENST00000502971 TAF6LQ9Y6J9 622 aa26.23■■□□□ 1.79
PTPN13-205ENST00000502971 PDE6AP16499 860 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 MCM4P33991 863 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 GRAPQ13588 217 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 GRAPLQ8TC17 118 aaPredicted RBP26.22■■□□□ 1.79
PTPN13-205ENST00000502971 NEK1Q96PY6 1258 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 SH2B1Q9NRF2 756 aaPredicted RBP26.22■■□□□ 1.79
PTPN13-205ENST00000502971 GPAA1O43292 621 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 GBP4Q96PP9 640 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 DOCK2Q92608 1830 aa26.22■■□□□ 1.79
PTPN13-205ENST00000502971 HMGB1P09429 215 aaKnown RBP26.21■■□□□ 1.79
PTPN13-205ENST00000502971 ZNF532Q9HCE3 1301 aa26.21■■□□□ 1.79
PTPN13-205ENST00000502971 TCRBV5S4A2TA0A5A2 114 aa26.2■■□□□ 1.79
PTPN13-205ENST00000502971 WWC3Q9ULE0 1092 aa26.19■■□□□ 1.78
PTPN13-205ENST00000502971 GYG1P46976 350 aa26.19■■□□□ 1.78
PTPN13-205ENST00000502971 CRY2Q49AN0 593 aa26.19■■□□□ 1.78
PTPN13-205ENST00000502971 CLEC17AQ6ZS10 378 aa26.19■■□□□ 1.78
PTPN13-205ENST00000502971 FAM84BQ96KN1 310 aaPredicted RBP26.19■■□□□ 1.78
PTPN13-205ENST00000502971 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.19■■□□□ 1.78
PTPN13-205ENST00000502971 POLRMTO00411 1230 aaKnown RBP26.18■■□□□ 1.78
PTPN13-205ENST00000502971 SEMA3EO15041 775 aa26.18■■□□□ 1.78
PTPN13-205ENST00000502971 FBXO33Q7Z6M2 555 aa26.18■■□□□ 1.78
PTPN13-205ENST00000502971 VPS37DQ86XT2 251 aa26.18■■□□□ 1.78
PTPN13-205ENST00000502971 DENND2AQ9ULE3 1009 aa26.18■■□□□ 1.78
PTPN13-205ENST00000502971 ZBTB22O15209 634 aa26.17■■□□□ 1.78
PTPN13-205ENST00000502971 FOXP2O15409 715 aa26.17■■□□□ 1.78
PTPN13-205ENST00000502971 DDR1Q08345 913 aa26.17■■□□□ 1.78
PTPN13-205ENST00000502971 RPGRQ92834 1020 aaKnown RBP26.17■■□□□ 1.78
PTPN13-205ENST00000502971 MYO5AQ9Y4I1 1855 aaKnown RBP26.17■■□□□ 1.78
PTPN13-205ENST00000502971 DDX11L8A8MPP1 907 aa26.17■■□□□ 1.78
PTPN13-205ENST00000502971 IMMTQ16891 758 aaKnown RBP26.16■■□□□ 1.78
PTPN13-205ENST00000502971 STOX1Q6ZVD7 989 aa26.16■■□□□ 1.78
PTPN13-205ENST00000502971 MAGEB6Q8N7X4 407 aa26.16■■□□□ 1.78
PTPN13-205ENST00000502971 RBM17Q96I25 401 aaKnown RBP26.16■■□□□ 1.78
PTPN13-205ENST00000502971 WTIPA6NIX2 430 aaPredicted RBP26.15■■□□□ 1.78
PTPN13-205ENST00000502971 FGAP02671 866 aa26.15■■□□□ 1.78
PTPN13-205ENST00000502971 LARP6Q9BRS8 491 aaKnown RBP26.15■■□□□ 1.78
PTPN13-205ENST00000502971 PDS5AQ29RF7 1337 aaKnown RBP26.15■■□□□ 1.78
PTPN13-205ENST00000502971 E7EWF7 191 aa26.14■■□□□ 1.78
PTPN13-205ENST00000502971 TOB2Q14106 344 aaPredicted RBP26.14■■□□□ 1.78
PTPN13-205ENST00000502971 SLC16A10Q8TF71 515 aa26.14■■□□□ 1.78
PTPN13-205ENST00000502971 AIDAQ96BJ3 306 aa26.14■■□□□ 1.78
PTPN13-205ENST00000502971 LRP2BPQ9P2M1 347 aa26.14■■□□□ 1.78
PTPN13-205ENST00000502971 LEMD3Q9Y2U8 911 aa26.14■■□□□ 1.78
PTPN13-205ENST00000502971 COL9A3Q14050 684 aaPredicted RBP26.14■■□□□ 1.77
PTPN13-205ENST00000502971 DHX32Q7L7V1 743 aaKnown RBP26.14■■□□□ 1.77
PTPN13-205ENST00000502971 TPCN1Q9ULQ1 816 aa26.14■■□□□ 1.77
PTPN13-205ENST00000502971 LARGE1O95461 756 aa26.13■■□□□ 1.77
PTPN13-205ENST00000502971 HIBADHP31937 336 aaKnown RBP26.13■■□□□ 1.77
PTPN13-205ENST00000502971 ME3Q16798 604 aa26.13■■□□□ 1.77
PTPN13-205ENST00000502971 TTLL5Q6EMB2 1281 aa26.13■■□□□ 1.77
PTPN13-205ENST00000502971 STRBPQ96SI9 672 aaKnown RBP26.13■■□□□ 1.77
PTPN13-205ENST00000502971 KLRG2A4D1S0 409 aaPredicted RBP26.12■■□□□ 1.77
PTPN13-205ENST00000502971 PTMSP20962 102 aa26.12■■□□□ 1.77
PTPN13-205ENST00000502971 IQSEC3Q9UPP2 1182 aaPredicted RBP26.12■■□□□ 1.77
PTPN13-205ENST00000502971 HOXA10P31260 410 aaPredicted RBP26.11■■□□□ 1.77
PTPN13-205ENST00000502971 PKP1Q13835 747 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 TCEANC2Q96MN5 208 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 XDHP47989 1333 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 ALX1Q15699 326 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 SMC3Q9UQE7 1217 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 ZDHHC9Q9Y397 364 aa26.11■■□□□ 1.77
PTPN13-205ENST00000502971 COL1A1P02452 1464 aaPredicted RBP26.11■■□□□ 1.77
PTPN13-205ENST00000502971 NRXN2Q9P2S2 1712 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 ZMYM6O95789 1325 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 IRS2Q9Y4H2 1338 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 A0A0G2JLW4 131 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 ZNF213O14771 459 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 BBOX1O75936 387 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 Q6ZUG5 572 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 CCDC83Q8IWF9 413 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 CRAMP1Q96RY5 1269 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 ANKIB1Q9P2G1 1089 aa26.1■■□□□ 1.77
PTPN13-205ENST00000502971 PATL2C9JE40 543 aaKnown RBP26.09■■□□□ 1.77
PTPN13-205ENST00000502971 BRD1O95696 1058 aa26.09■■□□□ 1.77
PTPN13-205ENST00000502971 GNAT2P19087 354 aa26.09■■□□□ 1.77
PTPN13-205ENST00000502971 KLRK1P26718 216 aa26.09■■□□□ 1.77
PTPN13-205ENST00000502971 EXOSC10Q01780 885 aaKnown RBP26.09■■□□□ 1.77
PTPN13-205ENST00000502971 LAMA4Q16363 1823 aa26.09■■□□□ 1.77
PTPN13-205ENST00000502971 BAG4O95429 457 aaKnown RBP26.08■■□□□ 1.77
PTPN13-205ENST00000502971 ABCF2Q9UG63 623 aa26.08■■□□□ 1.77
PTPN13-205ENST00000502971 MBD4O95243 580 aa26.08■■□□□ 1.76
PTPN13-205ENST00000502971 C15orf52Q6ZUT6 534 aaKnown RBP26.08■■□□□ 1.76
PTPN13-205ENST00000502971 RAI14Q9P0K7 980 aa26.08■■□□□ 1.76
PTPN13-205ENST00000502971 GOLGA6L22H0YM25 854 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 APPP05067 770 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms