RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 C1orf115Q9H7X2 142 aa13.26□□□□□ -0.29
UBE2D3-212ENST00000502563 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
UBE2D3-212ENST00000502563 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 VPS37DQ86XT2 251 aa13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 ZNF512BQ96KM6 892 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
UBE2D3-212ENST00000502563 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 H7C1D1 291 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 TFCP2Q12800 502 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 MTMR14Q8NCE2 650 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-212ENST00000502563 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 EPS15P42566 896 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 GYG1P46976 350 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 HDLBPQ00341 1268 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 OGFOD1Q8N543 542 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
UBE2D3-212ENST00000502563 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 GTF2IP78347 998 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 TNNI3KQ59H18 835 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 CCDC102BQ68D86 513 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 DENND2AQ9ULE3 1009 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 FPGT-TNNI3KV9GXZ4 949 aa13.22□□□□□ -0.29
UBE2D3-212ENST00000502563 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 BCAMP50895 628 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 TMED8Q6PL24 325 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
UBE2D3-212ENST00000502563 MAST3O60307 1309 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 TIMM10P62072 90 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 ZBED3Q96IU2 234 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-212ENST00000502563 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
UBE2D3-212ENST00000502563 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 COL1A1P02452 1464 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 PHKA1P46020 1223 aa13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
UBE2D3-212ENST00000502563 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 ADORA1P30542 326 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 TRPM4Q8TD43 1214 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-212ENST00000502563 WNT10BO00744 389 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 HHIPL2Q6UWX4 724 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
UBE2D3-212ENST00000502563 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 EGFRP00533 1210 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 HSPA6P17066 643 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 SPTY2D1Q68D10 685 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 CNTROBQ8N137 903 aa13.15□□□□□ -0.3
UBE2D3-212ENST00000502563 SPATA5Q8NB90 893 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms