RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 POLLQ9UGP5 575 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 FRAT2O75474 233 aaPredicted RBP16.25■□□□□ 0.19
SGCA-203ENST00000502555 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
SGCA-203ENST00000502555 DPEP1P16444 411 aa16.25■□□□□ 0.19
SGCA-203ENST00000502555 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
SGCA-203ENST00000502555 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
SGCA-203ENST00000502555 APPBP2Q92624 585 aa16.25■□□□□ 0.19
SGCA-203ENST00000502555 EYA3Q99504 573 aa16.25■□□□□ 0.19
SGCA-203ENST00000502555 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
SGCA-203ENST00000502555 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
SGCA-203ENST00000502555 ADD2P35612 726 aa16.24■□□□□ 0.19
SGCA-203ENST00000502555 PTGER2P43116 358 aa16.24■□□□□ 0.19
SGCA-203ENST00000502555 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
SGCA-203ENST00000502555 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
SGCA-203ENST00000502555 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
SGCA-203ENST00000502555 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
SGCA-203ENST00000502555 SNED1Q8TER0 1413 aa16.24■□□□□ 0.19
SGCA-203ENST00000502555 IL1R1P14778 569 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 PDE6AP16499 860 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 KCNA3P22001 575 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
SGCA-203ENST00000502555 COA1Q9GZY4 146 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
SGCA-203ENST00000502555 A0A0G2JLW4 131 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 ZNF589Q86UQ0 364 aaPredicted RBP16.22■□□□□ 0.19
SGCA-203ENST00000502555 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
SGCA-203ENST00000502555 ZC3H12CQ9C0D7 883 aaKnown RBP16.22■□□□□ 0.19
SGCA-203ENST00000502555 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 LRP2BPQ9P2M1 347 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 MAST3O60307 1309 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
SGCA-203ENST00000502555 CHGBP05060 677 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 ANAPC15P60006 121 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 KIAA1551Q9HCM1 1747 aa16.21■□□□□ 0.19
SGCA-203ENST00000502555 TCRBV5S4A2TA0A5A2 114 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 HSPA4P34932 840 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
SGCA-203ENST00000502555 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
SGCA-203ENST00000502555 RTKN2Q8IZC4 609 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 MAP4K1Q92918 833 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
SGCA-203ENST00000502555 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 ABCF2Q9UG63 623 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
SGCA-203ENST00000502555 M0R2C6 588 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 C21orf2O43822 256 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 PTH1RQ03431 593 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 DSCC1Q9BVC3 393 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
SGCA-203ENST00000502555 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 PSMD1Q99460 953 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 KIF2CQ99661 725 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 RAI14Q9P0K7 980 aa16.19■□□□□ 0.18
SGCA-203ENST00000502555 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
SGCA-203ENST00000502555 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
SGCA-203ENST00000502555 MYH7P12883 1935 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 GPAA1O43292 621 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 RABEP1Q15276 862 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 IL27Q8NEV9 243 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 KCNB2Q92953 911 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
SGCA-203ENST00000502555 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SGCA-203ENST00000502555 CACNA1SQ13698 1873 aa16.18■□□□□ 0.18
SGCA-203ENST00000502555 G3V3G9 751 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 CYP7A1P22680 504 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 NECTIN1Q15223 517 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 RNF20Q5VTR2 975 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
SGCA-203ENST00000502555 PODNQ7Z5L7 613 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
SGCA-203ENST00000502555 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
SGCA-203ENST00000502555 MAST2Q6P0Q8 1798 aa16.16■□□□□ 0.18
SGCA-203ENST00000502555 MYH13Q9UKX3 1938 aa16.16■□□□□ 0.18
SGCA-203ENST00000502555 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
SGCA-203ENST00000502555 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
SGCA-203ENST00000502555 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
SGCA-203ENST00000502555 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
SGCA-203ENST00000502555 IPO9Q96P70 1041 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms