RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RUSC2Q8N2Y8 1516 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 ERCC6L2Q5T890 1561 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 KIF27Q86VH2 1401 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 FAM221BA6H8Z2 402 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 H7C1W4 665 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 KHNYNO15037 678 aaKnown RBP5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 ATXN7O15265 892 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 MAFGO15525 162 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 SAMD5Q5TGI4 173 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 KRT25Q7Z3Z0 450 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 RAVER1Q8IY67 606 aaKnown RBP5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 EPS8L3Q8TE67 593 aaKnown RBP5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 EHD4Q9H223 541 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 C11orf16Q9NQ32 467 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 FANCLQ9NW38 375 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 TMEM63CQ9P1W3 806 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 PRKAB1Q9Y478 270 aa5.69□□□□□ -1.5
HMGB1P21-201ENST00000502313 DCDC2BA2VCK2 349 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 DGAT1O75907 488 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 POLR3DP05423 398 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 USP17L7P0C7H9 530 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 RARAP10276 462 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 GSTT1P30711 240 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 IRS1P35568 1242 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 GYS2P54840 703 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 EVA1CP58658 441 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 CCINQ13939 588 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 ODR4Q5SWX8 454 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 ZFYVE27Q5T4F4 411 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 USPL1Q5W0Q7 1092 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 NME8Q8N427 588 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 GPRASP2Q96D09 838 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 ZFP42Q96MM3 310 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 BCO2Q9BYV7 579 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 SLKQ9H2G2 1235 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 ZNF408Q9H9D4 720 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 THRAP3Q9Y2W1 955 aaKnown RBP5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 KCNMB2Q9Y691 235 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 PRXQ9BXM0 1461 aa5.68□□□□□ -1.5
HMGB1P21-201ENST00000502313 EREGO14944 169 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 AVPP01185 164 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 SSBP05455 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 PSAPP07602 524 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 ETFBP38117 255 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 MAP9Q49MG5 647 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 ANKS3Q6ZW76 656 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 FERMT3Q86UX7 667 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 NCAPG2Q86XI2 1143 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 GALNT12Q8IXK2 581 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 C7orf43Q8WVR3 580 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 TSR2Q969E8 191 aaKnown RBP5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 NUCKS1Q9H1E3 243 aaKnown RBP5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 SNTG2Q9NY99 539 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 SIRPGQ9P1W8 387 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 PCDHGC4Q9Y5F7 938 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 KIAA0586Q9BVV6 1533 aa5.67□□□□□ -1.5
HMGB1P21-201ENST00000502313 CCDC85CA6NKD9 419 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 CDC45O75419 566 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 SASH3O75995 380 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 EGFRP00533 1210 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 FAM157BP0CG42 384 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 FOXD4Q12950 439 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 DIEXFQ68CQ4 756 aaKnown RBP5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 FOXR1Q6PIV2 292 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 NXPE4Q6UWF7 544 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 TRIM46Q7Z4K8 759 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 C11orf96Q7Z7L8 435 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 PRPF38AQ8NAV1 312 aaKnown RBP5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 SH3TC2Q8TF17 1288 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 KLRG1Q96E93 195 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 PLCD4Q9BRC7 762 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 ZCCHC2Q9C0B9 1178 aaKnown RBP5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 SUV39H2Q9H5I1 410 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 COPRSQ9NQ92 184 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 KANSL3Q9P2N6 904 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 DNMT3LQ9UJW3 386 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 PHF24Q9UPV7 400 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 EID1Q9Y6B2 187 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 CARMIL1Q5VZK9 1371 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 CUL7Q14999 1698 aa5.66□□□□□ -1.5
HMGB1P21-201ENST00000502313 ESYT3A0FGR9 886 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 FAM177BA6PVY3 158 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 MASP1P48740 699 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 SMCPP49901 116 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 HYAL2Q12891 473 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 PWP1Q13610 501 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 LAMC2Q13753 1193 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 LONRF3Q496Y0 759 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 C4orf46Q504U0 113 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 LILRB2Q8N423 598 aa5.65□□□□□ -1.5
HMGB1P21-201ENST00000502313 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms