RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
ZCCHC3-201ENST00000500893 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
ZCCHC3-201ENST00000500893 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
ZCCHC3-201ENST00000500893 NDUFA8P51970 172 aa19.29■□□□□ 0.68
ZCCHC3-201ENST00000500893 CEP57L1Q8IYX8 460 aa19.29■□□□□ 0.68
ZCCHC3-201ENST00000500893 EXOSC10Q01780 885 aaKnown RBP19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 IQSEC3Q9UPP2 1182 aaPredicted RBP19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 LLPHQ9BRT6 129 aaKnown RBP19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 GREM2Q9H772 168 aa19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 AKAP2Q9Y2D5 859 aa19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
ZCCHC3-201ENST00000500893 FAM160A1Q05DH4 1040 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 HLFQ16534 295 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 MRPS27Q92552 414 aaKnown RBP19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 SKILP12757 684 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 FDPSP14324 419 aaKnown RBP19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 ITGA6P23229 1130 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 LRRFIP1Q32MZ4 808 aaKnown RBP19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 NCOA7Q8NI08 942 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 ANO10Q9NW15 660 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 RCOR1Q9UKL0 485 aa19.27■□□□□ 0.68
ZCCHC3-201ENST00000500893 B4E1Z4 1266 aa19.27■□□□□ 0.67
ZCCHC3-201ENST00000500893 TCIRG1Q13488 830 aa19.27■□□□□ 0.67
ZCCHC3-201ENST00000500893 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.67
ZCCHC3-201ENST00000500893 IGSF3O75054 1194 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 ZNF710Q8N1W2 664 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 SPTLC3Q9NUV7 552 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 TDRD7Q8NHU6 1098 aaKnown RBP19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 ZKSCAN3Q9BRR0 538 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 RGPD5Q99666 1765 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 CHMP4CQ96CF2 233 aa19.26■□□□□ 0.67
ZCCHC3-201ENST00000500893 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 LMOD1P29536 600 aaPredicted RBP19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 CCDC69A6NI79 296 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 USP27XA6NNY8 438 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 SPTLC2O15270 562 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 DPCR1Q3MIW9 517 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
ZCCHC3-201ENST00000500893 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 CHD2O14647 1828 aaKnown RBP19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 CMTR1Q8N1G2 835 aaKnown RBP19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 APPBP2Q92624 585 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 ALG1Q9BT22 464 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 SENP2Q9HC62 589 aa19.24■□□□□ 0.67
ZCCHC3-201ENST00000500893 STARD3NLO95772 234 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 U2AF2P26368 475 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 MCAMP43121 646 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 SNW1Q13573 536 aaKnown RBP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 PLA2G4DQ86XP0 818 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 ZNF274Q96GC6 653 aaPredicted RBP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 NAT10Q9H0A0 1025 aaKnown RBP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 SLC3A2P08195 630 aaKnown RBP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 METAP2P50579 478 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 TMC6Q7Z403 805 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 CTAGE5O15320 804 aa19.23■□□□□ 0.67
ZCCHC3-201ENST00000500893 WDR17Q8IZU2 1322 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 PHKA1P46020 1223 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 IQCB1Q15051 598 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 IFNKQ9P0W0 207 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 ANKRD18BA2A2Z9 1011 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
ZCCHC3-201ENST00000500893 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 MTERF4Q7Z6M4 381 aaKnown RBP19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 PIGBQ92521 554 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 TRIM29Q14134 588 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 MYSM1Q5VVJ2 828 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 NKX2-3Q8TAU0 364 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 ZNF532Q9HCE3 1301 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 SLIT3O75094 1523 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 FBXO18Q8NFZ0 1043 aa19.21■□□□□ 0.67
ZCCHC3-201ENST00000500893 ANTXR2P58335 489 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 PTPN14Q15678 1187 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 FAM177A1Q8N128 213 aaPredicted RBP19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 LINC00301Q8NCQ3 95 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 CLIC6Q96NY7 704 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 SLC26A6Q9BXS9 759 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 ZNF202O95125 648 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 CPLX2Q6PUV4 134 aaKnown RBP19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 MIGA1Q8NAN2 632 aa19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
ZCCHC3-201ENST00000500893 TMEM67Q5HYA8 995 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms