RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 USP44Q9H0E7 712 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
MED28-202ENST00000499786 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 THSD7AQ9UPZ6 1657 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 BCL9LQ86UU0 1499 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 RAB11FIP3O75154 756 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 WNT7BP56706 349 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
MED28-202ENST00000499786 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 BMP2KLQ5H9B9 411 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 ERC1Q8IUD2 1116 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 LRRCC1Q9C099 1032 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 BCL11AQ9H165 835 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 ASAP1Q9ULH1 1129 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 TJP1Q07157 1748 aa8.6□□□□□ -1.03
MED28-202ENST00000499786 CICQ96RK0 1608 aaPredicted RBP8.59□□□□□ -1.03
MED28-202ENST00000499786 NEURL1BA8MQ27 555 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 PIP4K2AP48426 406 aaPredicted RBP8.59□□□□□ -1.03
MED28-202ENST00000499786 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
MED28-202ENST00000499786 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 GPATCH3Q96I76 525 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 EXOC6BQ9Y2D4 811 aa8.59□□□□□ -1.03
MED28-202ENST00000499786 UTYO14607 1347 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 AFF2P51816 1311 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
MED28-202ENST00000499786 NBPF7P0C2Y1 421 aaPredicted RBP8.58□□□□□ -1.04
MED28-202ENST00000499786 GCKRQ14397 625 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 PNMA1Q8ND90 353 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 SSH3Q8TE77 659 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 FOXJ1Q92949 421 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 KIF1BPQ96EK5 621 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 ACSBG1Q96GR2 724 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 ARXQ96QS3 562 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 CWC25Q9NXE8 425 aaPredicted RBP8.58□□□□□ -1.04
MED28-202ENST00000499786 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
MED28-202ENST00000499786 NHSQ6T4R5 1651 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 PNMA6EA0A0J9YXQ4 647 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 CDC45O75419 566 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 A1BGP04217 495 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 MTX1Q13505 466 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 TTC22Q5TAA0 569 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
MED28-202ENST00000499786 C1QTNF2Q9BXJ5 285 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 TRPC5Q9UL62 973 aaPredicted RBP8.57□□□□□ -1.04
MED28-202ENST00000499786 ANKRD36CQ5JPF3 1778 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 COL15A1P39059 1388 aa8.57□□□□□ -1.04
MED28-202ENST00000499786 AOX1Q06278 1338 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 ATRNO75882 1429 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 A0A087WZG4 1122 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 RAD21O60216 631 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
MED28-202ENST00000499786 IGKV5-2P06315 115 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 MX1P20591 662 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 ABL2P42684 1182 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 G3BP1Q13283 466 aaKnown RBP eCLIP8.56□□□□□ -1.04
MED28-202ENST00000499786 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
MED28-202ENST00000499786 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 LRP10Q7Z4F1 713 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 CCDC191Q8NCU4 936 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 SUCLG2Q96I99 432 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
MED28-202ENST00000499786 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 ZNF831Q5JPB2 1677 aa8.56□□□□□ -1.04
MED28-202ENST00000499786 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 ZBBXA8MT70 800 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 WNT7AO00755 349 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 SIAH2O43255 324 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 CYP19A1P11511 503 aaPredicted RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 IL6STP40189 918 aaPredicted RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 SIK1P57059 783 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 PTK2Q05397 1052 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 TTLL7Q6ZT98 887 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
MED28-202ENST00000499786 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 RREB1Q92766 1687 aa8.55□□□□□ -1.04
MED28-202ENST00000499786 ERC2O15083 957 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 GDF9O60383 454 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
MED28-202ENST00000499786 NR1H3Q13133 447 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms