RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 IQSEC3Q9UPP2 1182 aaPredicted RBP23.85■■□□□ 1.41
LINC01550-201ENST00000499006 DOK7Q18PE1 504 aa23.84■■□□□ 1.41
LINC01550-201ENST00000499006 PODNQ7Z5L7 613 aa23.84■■□□□ 1.41
LINC01550-201ENST00000499006 DBNDD1Q9H9R9 158 aa23.84■■□□□ 1.41
LINC01550-201ENST00000499006 HMG20BQ9P0W2 317 aa23.84■■□□□ 1.41
LINC01550-201ENST00000499006 PDS5AQ29RF7 1337 aaKnown RBP23.84■■□□□ 1.41
LINC01550-201ENST00000499006 ECE2O60344 883 aa23.83■■□□□ 1.41
LINC01550-201ENST00000499006 PI16Q6UXB8 463 aa23.83■■□□□ 1.41
LINC01550-201ENST00000499006 LARGE2Q8N3Y3 721 aa23.83■■□□□ 1.41
LINC01550-201ENST00000499006 DENND2AQ9ULE3 1009 aa23.83■■□□□ 1.41
LINC01550-201ENST00000499006 GSPT1P15170 499 aaKnown RBP23.82■■□□□ 1.4
LINC01550-201ENST00000499006 SPATA5Q8NB90 893 aa23.82■■□□□ 1.4
LINC01550-201ENST00000499006 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
LINC01550-201ENST00000499006 NDUFB9Q9Y6M9 179 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 YDJCA8MPS7 323 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 G3V3G9 751 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 GRIN3BO60391 1043 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 ZAP70P43403 619 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 DCAF8Q5TAQ9 597 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 SNRKQ9NRH2 765 aa23.81■■□□□ 1.4
LINC01550-201ENST00000499006 FRAT2O75474 233 aaPredicted RBP23.8■■□□□ 1.4
LINC01550-201ENST00000499006 LMNB1P20700 586 aa23.8■■□□□ 1.4
LINC01550-201ENST00000499006 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
LINC01550-201ENST00000499006 CYP2E1P05181 493 aaPredicted RBP23.79■■□□□ 1.4
LINC01550-201ENST00000499006 BMP2KLQ5H9B9 411 aa23.79■■□□□ 1.4
LINC01550-201ENST00000499006 NIM1KQ8IY84 436 aa23.79■■□□□ 1.4
LINC01550-201ENST00000499006 DNAJC2Q99543 621 aaKnown RBP23.79■■□□□ 1.4
LINC01550-201ENST00000499006 EDC3Q96F86 508 aaKnown RBP23.78■■□□□ 1.4
LINC01550-201ENST00000499006 KCNQ5Q9NR82 932 aa23.78■■□□□ 1.4
LINC01550-201ENST00000499006 PAG1Q9NWQ8 432 aa23.78■■□□□ 1.4
LINC01550-201ENST00000499006 ZNRF3Q9ULT6 936 aa23.78■■□□□ 1.4
LINC01550-201ENST00000499006 MAP4K4O95819 1239 aaPredicted RBP23.77■■□□□ 1.4
LINC01550-201ENST00000499006 JDP2Q8WYK2 163 aa23.77■■□□□ 1.4
LINC01550-201ENST00000499006 ANTXR1Q9H6X2 564 aa23.77■■□□□ 1.4
LINC01550-201ENST00000499006 SALL1Q9NSC2 1324 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 GOLIM4O00461 696 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 GTF2IP78347 998 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 TTLL5Q6EMB2 1281 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 WDR66Q8TBY9 1149 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 MAST2Q6P0Q8 1798 aa23.76■■□□□ 1.39
LINC01550-201ENST00000499006 SDSP20132 328 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 CHAF1AQ13111 956 aaPredicted RBP23.75■■□□□ 1.39
LINC01550-201ENST00000499006 EVI5LQ96CN4 794 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 JAG2Q9Y219 1238 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 FZD9O00144 591 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 TTF1Q15361 905 aaPredicted RBP23.75■■□□□ 1.39
LINC01550-201ENST00000499006 STRIP1Q5VSL9 837 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 CNTROBQ8N137 903 aa23.75■■□□□ 1.39
LINC01550-201ENST00000499006 MYH2Q9UKX2 1941 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 USP17L3A6NCW0 530 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 USP17L4A6NCW7 530 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 TRIM6-TRIM34B2RNG4 842 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 TBC1D9Q6ZT07 1266 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 USP17L1Q7RTZ2 530 aa23.74■■□□□ 1.39
LINC01550-201ENST00000499006 PIH1D3Q9NQM4 214 aaKnown RBP23.74■■□□□ 1.39
LINC01550-201ENST00000499006 FKBP1AP62942 108 aaKnown RBP23.73■■□□□ 1.39
LINC01550-201ENST00000499006 DACT2Q5SW24 774 aa23.73■■□□□ 1.39
LINC01550-201ENST00000499006 KBTBD3Q8NAB2 608 aa23.73■■□□□ 1.39
LINC01550-201ENST00000499006 TBC1D22AQ8WUA7 517 aa23.73■■□□□ 1.39
LINC01550-201ENST00000499006 CXCL9Q07325 125 aa23.72■■□□□ 1.39
LINC01550-201ENST00000499006 ZGPATQ8N5A5 531 aaKnown RBP23.72■■□□□ 1.39
LINC01550-201ENST00000499006 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
LINC01550-201ENST00000499006 MFSD14BQ5SR56 506 aa23.71■■□□□ 1.39
LINC01550-201ENST00000499006 C9orf131Q5VYM1 1079 aa23.71■■□□□ 1.39
LINC01550-201ENST00000499006 CERS5Q8N5B7 392 aa23.71■■□□□ 1.39
LINC01550-201ENST00000499006 RNF181Q9P0P0 153 aa23.71■■□□□ 1.39
LINC01550-201ENST00000499006 RAD17O75943 681 aa23.7■■□□□ 1.38
LINC01550-201ENST00000499006 VIL1P09327 827 aaKnown RBP23.7■■□□□ 1.38
LINC01550-201ENST00000499006 ABCF2Q9UG63 623 aa23.7■■□□□ 1.38
LINC01550-201ENST00000499006 PSMD14O00487 310 aa23.69■■□□□ 1.38
LINC01550-201ENST00000499006 TICAM2Q86XR7 235 aa23.69■■□□□ 1.38
LINC01550-201ENST00000499006 FBXW7Q969H0 707 aa23.69■■□□□ 1.38
LINC01550-201ENST00000499006 MXD3Q9BW11 206 aa23.69■■□□□ 1.38
LINC01550-201ENST00000499006 RFX7Q2KHR2 1363 aa23.69■■□□□ 1.38
LINC01550-201ENST00000499006 IGSF3O75054 1194 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 PRDX5P30044 214 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 GRIK5Q16478 980 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 CIAPIN1Q6FI81 312 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 FSD1Q9BTV5 496 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 SUGT1Q9Y2Z0 365 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 SPTY2D1Q68D10 685 aaPredicted RBP23.68■■□□□ 1.38
LINC01550-201ENST00000499006 ERICH6Q7L0X2 663 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 LRP2BPQ9P2M1 347 aa23.68■■□□□ 1.38
LINC01550-201ENST00000499006 ZNF541Q9H0D2 1346 aa23.67■■□□□ 1.38
LINC01550-201ENST00000499006 IDH1O75874 414 aaKnown RBP23.67■■□□□ 1.38
LINC01550-201ENST00000499006 EIF6P56537 245 aaKnown RBP23.67■■□□□ 1.38
LINC01550-201ENST00000499006 RSBN1LQ6PCB5 846 aaPredicted RBP23.67■■□□□ 1.38
LINC01550-201ENST00000499006 ADAMTSL1Q8N6G6 1762 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 LDHBP07195 334 aaKnown RBP23.66■■□□□ 1.38
LINC01550-201ENST00000499006 MAP3K12Q12852 859 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 TNIP1Q15025 636 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 ZNF384Q8TF68 577 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 GMLQ99445 158 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 MYO3BQ8WXR4 1341 aa23.66■■□□□ 1.38
LINC01550-201ENST00000499006 NSUN4Q96CB9 384 aaKnown RBP23.65■■□□□ 1.38
LINC01550-201ENST00000499006 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.65■■□□□ 1.38
LINC01550-201ENST00000499006 RAI14Q9P0K7 980 aa23.65■■□□□ 1.38
LINC01550-201ENST00000499006 ZC3H4Q9UPT8 1303 aaKnown RBP23.65■■□□□ 1.38
LINC01550-201ENST00000499006 DCAF8L1A6NGE4 600 aa23.64■■□□□ 1.38
LINC01550-201ENST00000499006 CHGBP05060 677 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms