RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
GPATCH4-210ENST00000498756 CCDC158Q5M9N0 1113 aa13.22□□□□□ -0.29
GPATCH4-210ENST00000498756 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
GPATCH4-210ENST00000498756 ECE2O60344 883 aa13.21□□□□□ -0.29
GPATCH4-210ENST00000498756 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
GPATCH4-210ENST00000498756 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
GPATCH4-210ENST00000498756 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
GPATCH4-210ENST00000498756 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.29
GPATCH4-210ENST00000498756 ARAP2Q8WZ64 1704 aa13.21□□□□□ -0.3
GPATCH4-210ENST00000498756 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 CHGBP05060 677 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 GTF2IP78347 998 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 VPS37DQ86XT2 251 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 HAUS7Q99871 368 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 VPS33BQ9H267 617 aa13.2□□□□□ -0.3
GPATCH4-210ENST00000498756 GLTPD2A6NH11 291 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 RAD17O75943 681 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 TOMM70O94826 608 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 CXCL9Q07325 125 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 CERS5Q8N5B7 392 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 PIH1D3Q9NQM4 214 aaKnown RBP13.19□□□□□ -0.3
GPATCH4-210ENST00000498756 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 G3V3G9 751 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 FZD9O00144 591 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 GOLIM4O00461 696 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
GPATCH4-210ENST00000498756 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 PSMD14O00487 310 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 ZBTB22O15209 634 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 SDSP20132 328 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 NIM1KQ8IY84 436 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
GPATCH4-210ENST00000498756 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 AOX1Q06278 1338 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 SEMA3EO15041 775 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
GPATCH4-210ENST00000498756 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 ERC2O15083 957 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 PRDX5P30044 214 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 GMLQ99445 158 aa13.15□□□□□ -0.3
GPATCH4-210ENST00000498756 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
GPATCH4-210ENST00000498756 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
GPATCH4-210ENST00000498756 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
GPATCH4-210ENST00000498756 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
GPATCH4-210ENST00000498756 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 POTECB2RU33 542 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 F8W031 263 aaPredicted RBP13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 HSPA6P17066 643 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
GPATCH4-210ENST00000498756 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-210ENST00000498756 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
GPATCH4-210ENST00000498756 SCNN1DP51172 638 aa13.11□□□□□ -0.31
GPATCH4-210ENST00000498756 EIF6P56537 245 aaKnown RBP13.11□□□□□ -0.31
GPATCH4-210ENST00000498756 MECOMQ03112 1051 aa13.11□□□□□ -0.31
GPATCH4-210ENST00000498756 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms