RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 RGMBQ6NW40 437 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 ZNF530Q6P9A1 599 aaPredicted RBP7.57□□□□□ -1.2
SPTA1-209ENST00000498708 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 CNBD1Q8NA66 436 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 SPIRE2Q8WWL2 714 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
SPTA1-209ENST00000498708 PGAP2Q9UHJ9 254 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 ANKRD26Q9UPS8 1709 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
SPTA1-209ENST00000498708 PITPNM2Q9BZ72 1349 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 SNED1Q8TER0 1413 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 MS4A1P11836 297 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 NPR1P16066 1061 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
SPTA1-209ENST00000498708 EIF4A2Q14240 407 aaKnown RBP7.56□□□□□ -1.2
SPTA1-209ENST00000498708 PLEKHO1Q53GL0 409 aaPredicted RBP7.56□□□□□ -1.2
SPTA1-209ENST00000498708 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 SLC51AQ86UW1 340 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
SPTA1-209ENST00000498708 PCGF6Q9BYE7 350 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 GPRC5DQ9NZD1 345 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 HDAC9Q9UKV0 1011 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 PCDHGC3Q9UN70 934 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 PAPPA2Q9BXP8 1791 aa7.56□□□□□ -1.2
SPTA1-209ENST00000498708 SPTBN5Q9NRC6 3674 aaKnown RBP7.55□□□□□ -1.2
SPTA1-209ENST00000498708 SCN7AQ01118 1682 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 NPHP1O15259 732 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 TBC1D8O95759 1140 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 CCNYL3P0C7X3 344 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 GJA5P36382 358 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 ZNF157P51786 506 aaPredicted RBP7.55□□□□□ -1.2
SPTA1-209ENST00000498708 ST5P78524 1137 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 TRIM26Q12899 539 aaPredicted RBP7.55□□□□□ -1.2
SPTA1-209ENST00000498708 GIGYF2Q6Y7W6 1299 aaKnown RBP7.55□□□□□ -1.2
SPTA1-209ENST00000498708 USP48Q86UV5 1035 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
SPTA1-209ENST00000498708 KIAA0100Q14667 2235 aaKnown RBP7.55□□□□□ -1.2
SPTA1-209ENST00000498708 VCANP13611 3396 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 SHTN1A0MZ66 631 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 J3QL48 77 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 SKOR1P84550 965 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 PTPRNQ16849 979 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 FBXO46Q6PJ61 603 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-209ENST00000498708 CDC37L1Q7L3B6 337 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 LARGE2Q8N3Y3 721 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 PSMD1Q99460 953 aa7.54□□□□□ -1.2
SPTA1-209ENST00000498708 A0A087WZG4 1122 aa7.53□□□□□ -1.2
SPTA1-209ENST00000498708 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-209ENST00000498708 MOXD2PA6NHM9 499 aa7.53□□□□□ -1.2
SPTA1-209ENST00000498708 EN2P19622 333 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-209ENST00000498708 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
SPTA1-209ENST00000498708 LGR6Q9HBX8 967 aa7.53□□□□□ -1.2
SPTA1-209ENST00000498708 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
SPTA1-209ENST00000498708 ZNF330Q9Y3S2 320 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-209ENST00000498708 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 H0YGN5 161 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 CAMTA2O94983 1202 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 NDUFV2P19404 249 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 GMPSP49915 693 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-209ENST00000498708 MTMR2Q13614 643 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 CNGB1Q14028 1251 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-209ENST00000498708 AMOTQ4VCS5 1084 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 C1orf141Q5JVX7 400 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 AEBP1Q8IUX7 1158 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 EHBP1Q8NDI1 1231 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 PRR7Q8TB68 274 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 PANK3Q9H999 370 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 SENP2Q9HC62 589 aa7.52□□□□□ -1.21
SPTA1-209ENST00000498708 GBA2Q9HCG7 927 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-209ENST00000498708 GMPR2Q9P2T1 348 aaKnown RBP7.52□□□□□ -1.21
SPTA1-209ENST00000498708 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
SPTA1-209ENST00000498708 ALDH1A1P00352 501 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 HSPA5P11021 654 aaKnown RBP7.51□□□□□ -1.21
SPTA1-209ENST00000498708 CXCL9Q07325 125 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 PTCRAQ6ISU1 281 aaPredicted RBP7.51□□□□□ -1.21
SPTA1-209ENST00000498708 TREML4Q6UXN2 200 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 MORC1Q86VD1 984 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 NBPF5PQ86XG9 351 aaPredicted RBP7.51□□□□□ -1.21
SPTA1-209ENST00000498708 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 R3HDMLQ9H3Y0 253 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 ATP13A2Q9NQ11 1180 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 EVA1BQ9NVM1 165 aa7.51□□□□□ -1.21
SPTA1-209ENST00000498708 NPC1L1Q9UHC9 1359 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 ADM5C9JUS6 153 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 GPR25O00155 361 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 TRIM66O15016 1216 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 STARD3NLO95772 234 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 ALDH1B1P30837 517 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 SULT6B1Q6IMI4 303 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 RASAL3Q86YV0 1011 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 NIM1KQ8IY84 436 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 HPS1Q92902 700 aa7.5□□□□□ -1.21
SPTA1-209ENST00000498708 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-209ENST00000498708 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms