RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
THBS3-209ENST00000498500 KCNJ4P48050 445 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 OTUD7BQ6GQQ9 843 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 CD99L2Q8TCZ2 262 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 KLRK1P26718 216 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 EFCC1Q9HA90 598 aa15.37■□□□□ 0.05
THBS3-209ENST00000498500 MYO1BO43795 1136 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
THBS3-209ENST00000498500 CRHR2Q13324 411 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 CWF19L2Q2TBE0 894 aaKnown RBP15.36■□□□□ 0.05
THBS3-209ENST00000498500 SUPT20HL1Q3ZLR7 823 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 UBE3BQ7Z3V4 1068 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 TMEM106CQ9BVX2 250 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 CD209Q9NNX6 404 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 PPP2R3BQ9Y5P8 575 aa15.36■□□□□ 0.05
THBS3-209ENST00000498500 CLRN2A0PK11 232 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 UNCXA6NJT0 531 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
THBS3-209ENST00000498500 ITGA6P23229 1130 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 IREB2P48200 963 aaKnown RBP15.35■□□□□ 0.05
THBS3-209ENST00000498500 SP3Q02447 781 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 TWISTNBQ3B726 338 aaPredicted RBP15.35■□□□□ 0.05
THBS3-209ENST00000498500 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 VEZTQ9HBM0 779 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 SSC5DA1L4H1 1573 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 BRCA2P51587 3418 aa15.35■□□□□ 0.05
THBS3-209ENST00000498500 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
THBS3-209ENST00000498500 NBPF12Q5TAG4 269 aaPredicted RBP15.34■□□□□ 0.05
THBS3-209ENST00000498500 MTMR14Q8NCE2 650 aa15.34■□□□□ 0.05
THBS3-209ENST00000498500 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
THBS3-209ENST00000498500 OTOFQ9HC10 1997 aa15.34■□□□□ 0.05
THBS3-209ENST00000498500 H7C1W4 665 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 FXR1P51114 621 aaKnown RBP eCLIP15.33■□□□□ 0.04
THBS3-209ENST00000498500 RBM5P52756 815 aaKnown RBP eCLIP15.33■□□□□ 0.04
THBS3-209ENST00000498500 CHRNDQ07001 517 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 CFAP100Q494V2 611 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 CERS5Q8N5B7 392 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 STK31Q9BXU1 1019 aa15.33■□□□□ 0.04
THBS3-209ENST00000498500 A0A1B0GUL6 1792 aa15.32■□□□□ 0.04
THBS3-209ENST00000498500 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
THBS3-209ENST00000498500 GJA5P36382 358 aa15.32■□□□□ 0.04
THBS3-209ENST00000498500 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
THBS3-209ENST00000498500 NBPF11Q86T75 865 aa15.32■□□□□ 0.04
THBS3-209ENST00000498500 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
THBS3-209ENST00000498500 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 SNAP23O00161 211 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 TAF5LO75529 589 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 SLC4A8Q2Y0W8 1093 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 SLC9C1Q4G0N8 1177 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
THBS3-209ENST00000498500 PTPN18Q99952 460 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
THBS3-209ENST00000498500 ANKRD18BA2A2Z9 1011 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 TESPA1A2RU30 521 aaPredicted RBP15.3■□□□□ 0.04
THBS3-209ENST00000498500 VAMP4O75379 141 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 RASA3Q14644 834 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 G2E3Q7L622 706 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 OPTNQ96CV9 577 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 ZNF333Q96JL9 665 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
THBS3-209ENST00000498500 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
THBS3-209ENST00000498500 CSF1RP07333 972 aa15.29■□□□□ 0.04
THBS3-209ENST00000498500 CAP1Q01518 475 aa15.29■□□□□ 0.04
THBS3-209ENST00000498500 GCKRQ14397 625 aa15.29■□□□□ 0.04
THBS3-209ENST00000498500 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
THBS3-209ENST00000498500 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
THBS3-209ENST00000498500 AOX1Q06278 1338 aa15.28■□□□□ 0.04
THBS3-209ENST00000498500 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
THBS3-209ENST00000498500 IL1R1P14778 569 aa15.28■□□□□ 0.04
THBS3-209ENST00000498500 FKBP1AP62942 108 aaKnown RBP15.28■□□□□ 0.04
THBS3-209ENST00000498500 TNFAIP1Q13829 316 aa15.28■□□□□ 0.04
THBS3-209ENST00000498500 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
THBS3-209ENST00000498500 C15orf52Q6ZUT6 534 aaKnown RBP15.28■□□□□ 0.04
THBS3-209ENST00000498500 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
THBS3-209ENST00000498500 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
THBS3-209ENST00000498500 IRS2Q9Y4H2 1338 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 CASP7P55210 303 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 CCL15Q16663 113 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 MIER1Q8N108 512 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.04
THBS3-209ENST00000498500 PLIN1O60240 522 aa15.26■□□□□ 0.03
THBS3-209ENST00000498500 FLIIQ13045 1269 aa15.26■□□□□ 0.03
THBS3-209ENST00000498500 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
THBS3-209ENST00000498500 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
THBS3-209ENST00000498500 ZSWIM8A7E2V4 1837 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms