RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
HPS1-214ENST00000498219 SCARF1Q14162 830 aa18.28■□□□□ 0.52
HPS1-214ENST00000498219 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
HPS1-214ENST00000498219 USP48Q86UV5 1035 aa18.28■□□□□ 0.52
HPS1-214ENST00000498219 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
HPS1-214ENST00000498219 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
HPS1-214ENST00000498219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.28■□□□□ 0.52
HPS1-214ENST00000498219 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.52
HPS1-214ENST00000498219 ATP8B2P98198 1209 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 TFCP2Q12800 502 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 CAVIN4Q5BKX8 364 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 DNAJC5GQ8N7S2 189 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
HPS1-214ENST00000498219 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 DDX19BQ9UMR2 479 aa18.27■□□□□ 0.52
HPS1-214ENST00000498219 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
HPS1-214ENST00000498219 ADM5C9JUS6 153 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 SASH1O94885 1247 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 ADORA1P30542 326 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 LPIN2Q92539 896 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 PCDHAC2Q9Y5I4 1007 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 ARAP2Q8WZ64 1704 aa18.26■□□□□ 0.51
HPS1-214ENST00000498219 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 TMEM88BA6NKF7 163 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
HPS1-214ENST00000498219 POLA2Q14181 598 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 GRIK5Q16478 980 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 ANGEL2Q5VTE6 544 aaKnown RBP18.25■□□□□ 0.51
HPS1-214ENST00000498219 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 ZNF408Q9H9D4 720 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 CREBZFQ9NS37 354 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 ZBTB40Q9NUA8 1239 aa18.25■□□□□ 0.51
HPS1-214ENST00000498219 TIMM10P62072 90 aa18.24■□□□□ 0.51
HPS1-214ENST00000498219 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.51
HPS1-214ENST00000498219 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
HPS1-214ENST00000498219 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
HPS1-214ENST00000498219 DCPSQ96C86 337 aaKnown RBP18.24■□□□□ 0.51
HPS1-214ENST00000498219 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
HPS1-214ENST00000498219 MKRN1Q9UHC7 482 aaKnown RBP18.24■□□□□ 0.51
HPS1-214ENST00000498219 CST9Q5W186 159 aa18.23■□□□□ 0.51
HPS1-214ENST00000498219 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
HPS1-214ENST00000498219 KRT26Q7Z3Y9 468 aa18.23■□□□□ 0.51
HPS1-214ENST00000498219 SSH3Q8TE77 659 aa18.23■□□□□ 0.51
HPS1-214ENST00000498219 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
HPS1-214ENST00000498219 COL1A1P02452 1464 aaPredicted RBP18.22■□□□□ 0.51
HPS1-214ENST00000498219 WNT10BO00744 389 aa18.22■□□□□ 0.51
HPS1-214ENST00000498219 CELF2O95319 508 aaKnown RBP18.22■□□□□ 0.51
HPS1-214ENST00000498219 PHKA1P46020 1223 aa18.22■□□□□ 0.51
HPS1-214ENST00000498219 FKBP1AP62942 108 aaKnown RBP18.22■□□□□ 0.51
HPS1-214ENST00000498219 KLRG1Q96E93 195 aa18.22■□□□□ 0.51
HPS1-214ENST00000498219 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
HPS1-214ENST00000498219 A0A1B0GUL7 405 aa18.21■□□□□ 0.51
HPS1-214ENST00000498219 SURF6O75683 361 aaKnown RBP18.21■□□□□ 0.51
HPS1-214ENST00000498219 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
HPS1-214ENST00000498219 CFAP100Q494V2 611 aa18.21■□□□□ 0.51
HPS1-214ENST00000498219 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
HPS1-214ENST00000498219 AOX1Q06278 1338 aa18.21■□□□□ 0.51
HPS1-214ENST00000498219 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
HPS1-214ENST00000498219 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
HPS1-214ENST00000498219 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
HPS1-214ENST00000498219 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
HPS1-214ENST00000498219 RBM5P52756 815 aaKnown RBP eCLIP18.19■□□□□ 0.5
HPS1-214ENST00000498219 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
HPS1-214ENST00000498219 DLGAP5Q15398 846 aa18.19■□□□□ 0.5
HPS1-214ENST00000498219 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
HPS1-214ENST00000498219 CCDC102BQ68D86 513 aa18.19■□□□□ 0.5
HPS1-214ENST00000498219 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
HPS1-214ENST00000498219 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
HPS1-214ENST00000498219 CDCA5Q96FF9 252 aa18.18■□□□□ 0.5
HPS1-214ENST00000498219 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
HPS1-214ENST00000498219 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
HPS1-214ENST00000498219 AKAP2Q9Y2D5 859 aa18.18■□□□□ 0.5
HPS1-214ENST00000498219 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
HPS1-214ENST00000498219 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
HPS1-214ENST00000498219 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
HPS1-214ENST00000498219 MMP14P50281 582 aa18.16■□□□□ 0.5
HPS1-214ENST00000498219 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
HPS1-214ENST00000498219 PAXIP1Q6ZW49 1069 aaPredicted RBP18.16■□□□□ 0.5
HPS1-214ENST00000498219 TBC1D22AQ8WUA7 517 aa18.16■□□□□ 0.5
HPS1-214ENST00000498219 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
HPS1-214ENST00000498219 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
HPS1-214ENST00000498219 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
HPS1-214ENST00000498219 SPDYE2BA6NHP3 402 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 SPDYE6P0CI01 402 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 CRKP46108 304 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 VEGFBP49765 207 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 GRM1Q13255 1194 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
HPS1-214ENST00000498219 MTMR14Q8NCE2 650 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 TLL2Q9Y6L7 1015 aa18.15■□□□□ 0.5
HPS1-214ENST00000498219 RASSF10A6NK89 507 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 APBB1O00213 710 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 TNNI3KQ59H18 835 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 GORABQ5T7V8 394 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 WDR66Q8TBY9 1149 aa18.14■□□□□ 0.49
HPS1-214ENST00000498219 DBNDD2Q9BQY9 259 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms