RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 GJB6O95452 261 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 SCGB1D2O95969 90 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 MYL1P05976 194 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 GRM5P41594 1212 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 IDH3AP50213 366 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 FCGRTP55899 365 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 SETQ01105 290 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-224ENST00000497488 MCL1Q07820 350 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 HLTFQ14527 1009 aaKnown RBP eCLIP7.92□□□□□ -1.14
BRCA1-224ENST00000497488 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 HIF1AQ16665 826 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 PPP1R26Q5T8A7 1209 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-224ENST00000497488 LARP1BQ659C4 914 aaKnown RBP7.92□□□□□ -1.14
BRCA1-224ENST00000497488 CLEC4GQ6UXB4 293 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 NINJ1Q92982 152 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 SCYL1Q96KG9 808 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 CRBNQ96SW2 442 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 TNKS2Q9H2K2 1166 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 WASHC2CQ9Y4E1 1318 aa7.92□□□□□ -1.14
BRCA1-224ENST00000497488 A0A087X0B3 334 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 SHTN1A0MZ66 631 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 IFRD1O00458 451 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-224ENST00000497488 FBXO24O75426 580 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 SOX5P35711 763 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 TXLNAP40222 546 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 NFKB2Q00653 900 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 CENPCQ03188 943 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 SSRP1Q08945 709 aaKnown RBP7.91□□□□□ -1.14
BRCA1-224ENST00000497488 CLN3Q13286 438 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-224ENST00000497488 IER5Q5VY09 327 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 ZSWIM2Q8NEG5 633 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 LRRC3Q9BY71 257 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 OXCT2Q9BYC2 517 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-224ENST00000497488 NIFKQ9BYG3 293 aaKnown RBP7.91□□□□□ -1.14
BRCA1-224ENST00000497488 EHD4Q9H223 541 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 CHST12Q9NRB3 414 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 ZMYM5Q9UJ78 669 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 USP20Q9Y2K6 914 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 ROBO2Q9HCK4 1378 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 RB1CC1Q8TDY2 1594 aa7.91□□□□□ -1.14
BRCA1-224ENST00000497488 A0A0G2JS52 829 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 ATF3P18847 181 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 VEGFBP49765 207 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 BRD3Q15059 726 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 PPP4R4Q6NUP7 873 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 C1orf127Q8N9H9 656 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 ST13P5Q8NFI4 369 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-224ENST00000497488 ZNF669Q96BR6 464 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-224ENST00000497488 FERD3LQ96RJ6 166 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 ZNF700Q9H0M5 742 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 SFMBT1Q9UHJ3 866 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 RTCBQ9Y3I0 505 aaKnown RBP7.9□□□□□ -1.14
BRCA1-224ENST00000497488 KCNMB2Q9Y691 235 aa7.9□□□□□ -1.14
BRCA1-224ENST00000497488 NACADO15069 1562 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 A0A1W2PP55 124 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-224ENST00000497488 RASGRP1O95267 797 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 INPP5BP32019 993 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 ARSDP51689 593 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 FOXD4Q12950 439 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-224ENST00000497488 TMEM67Q5HYA8 995 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 FBXW10Q5XX13 1052 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
BRCA1-224ENST00000497488 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
BRCA1-224ENST00000497488 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 AKAP2Q9Y2D5 859 aa7.89□□□□□ -1.15
BRCA1-224ENST00000497488 ZCCHC6Q5VYS8 1495 aaKnown RBP7.88□□□□□ -1.15
BRCA1-224ENST00000497488 TLR3O15455 904 aaKnown RBP7.88□□□□□ -1.15
BRCA1-224ENST00000497488 PDE8AO60658 829 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 BPNT1O95861 308 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 CELA3AP09093 270 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-224ENST00000497488 CASP7P55210 303 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 SKOR1P84550 965 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 PERM1Q5SV97 790 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 AXDND1Q5T1B0 1012 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-224ENST00000497488 AGMOQ6ZNB7 445 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 C14orf80Q86SX3 495 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 RNF180Q86T96 592 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 MYO1HQ8N1T3 1032 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 TMTC2Q8N394 836 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
BRCA1-224ENST00000497488 AVENQ9NQS1 362 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-224ENST00000497488 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 S1PR4O95977 384 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 MCM4P33991 863 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 RAB27AP51159 221 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 ZRSR2Q15696 482 aaKnown RBP7.87□□□□□ -1.15
BRCA1-224ENST00000497488 TPTE2Q6XPS3 522 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 DTHD1Q6ZMT9 781 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 UBR7Q8N806 425 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 FBXO27Q8NI29 283 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 PMEPA1Q969W9 287 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 PLD4Q96BZ4 506 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms