RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 F12P00748 615 aaPredicted RBP10.56□□□□□ -0.72
ITGAV-208ENST00000496854 ST5P78524 1137 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 ERFEQ4G0M1 354 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 NUP98P52948 1817 aa10.56□□□□□ -0.72
ITGAV-208ENST00000496854 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 NPHP1O15259 732 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 DDNO94850 711 aaPredicted RBP10.55□□□□□ -0.72
ITGAV-208ENST00000496854 HSPA1AP0DMV8 641 aaKnown RBP10.55□□□□□ -0.72
ITGAV-208ENST00000496854 HSPA1BP0DMV9 641 aaKnown RBP10.55□□□□□ -0.72
ITGAV-208ENST00000496854 SH3BP2P78314 561 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 STYK1Q6J9G0 422 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 NBPF10Q6P3W6 841 aaKnown RBP10.55□□□□□ -0.72
ITGAV-208ENST00000496854 NBPF15Q8N660 670 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
ITGAV-208ENST00000496854 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
ITGAV-208ENST00000496854 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
ITGAV-208ENST00000496854 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.72
ITGAV-208ENST00000496854 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 MASTLQ96GX5 879 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 CFAP53Q96M91 514 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 ZNF541Q9H0D2 1346 aa10.54□□□□□ -0.72
ITGAV-208ENST00000496854 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 LCE2BO14633 110 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 AP1G2O75843 785 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
ITGAV-208ENST00000496854 SLC51AQ86UW1 340 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
ITGAV-208ENST00000496854 ZNF511Q8NB15 262 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 CNKSR1Q969H4 720 aa10.53□□□□□ -0.72
ITGAV-208ENST00000496854 LAMB2P55268 1798 aa10.52□□□□□ -0.72
ITGAV-208ENST00000496854 RIC1Q4ADV7 1423 aa10.52□□□□□ -0.73
ITGAV-208ENST00000496854 THSD7BQ9C0I4 1608 aa10.52□□□□□ -0.73
ITGAV-208ENST00000496854 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
ITGAV-208ENST00000496854 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
ITGAV-208ENST00000496854 CCDC93Q567U6 631 aa10.52□□□□□ -0.73
ITGAV-208ENST00000496854 HLFQ16534 295 aa10.51□□□□□ -0.73
ITGAV-208ENST00000496854 CLEC4GQ6UXB4 293 aa10.51□□□□□ -0.73
ITGAV-208ENST00000496854 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
ITGAV-208ENST00000496854 ZNF277Q9NRM2 450 aaPredicted RBP10.51□□□□□ -0.73
ITGAV-208ENST00000496854 NIP7Q9Y221 180 aaKnown RBP eCLIP10.51□□□□□ -0.73
ITGAV-208ENST00000496854 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
ITGAV-208ENST00000496854 ZNF652Q9Y2D9 606 aa10.51□□□□□ -0.73
ITGAV-208ENST00000496854 KLRG2A4D1S0 409 aaPredicted RBP10.5□□□□□ -0.73
ITGAV-208ENST00000496854 NPR1P16066 1061 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
ITGAV-208ENST00000496854 SOGA3Q5TF21 947 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 LRRN4Q8WUT4 740 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
ITGAV-208ENST00000496854 UBN2Q6ZU65 1347 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 PASKQ96RG2 1323 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 CNTNAP1P78357 1384 aa10.5□□□□□ -0.73
ITGAV-208ENST00000496854 J3QL48 77 aa10.49□□□□□ -0.73
ITGAV-208ENST00000496854 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
ITGAV-208ENST00000496854 ARMC2Q8NEN0 867 aa10.49□□□□□ -0.73
ITGAV-208ENST00000496854 THUMPD2Q9BTF0 503 aaKnown RBP10.49□□□□□ -0.73
ITGAV-208ENST00000496854 TAF1DQ9H5J8 278 aaPredicted RBP10.49□□□□□ -0.73
ITGAV-208ENST00000496854 MIS18AQ9NYP9 233 aa10.49□□□□□ -0.73
ITGAV-208ENST00000496854 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
ITGAV-208ENST00000496854 IBTKQ9P2D0 1353 aaPredicted RBP10.49□□□□□ -0.73
ITGAV-208ENST00000496854 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
ITGAV-208ENST00000496854 RFC5P40937 340 aa10.48□□□□□ -0.73
ITGAV-208ENST00000496854 AGERQ15109 404 aa10.48□□□□□ -0.73
ITGAV-208ENST00000496854 LDHDQ86WU2 507 aa10.48□□□□□ -0.73
ITGAV-208ENST00000496854 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
ITGAV-208ENST00000496854 SMPD1P17405 629 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
ITGAV-208ENST00000496854 IARSP41252 1262 aaKnown RBP10.47□□□□□ -0.73
ITGAV-208ENST00000496854 TAF7Q15545 349 aaPredicted RBP10.47□□□□□ -0.73
ITGAV-208ENST00000496854 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 PLEKHF1Q96S99 279 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 MAP3K15Q6ZN16 1313 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
ITGAV-208ENST00000496854 SIAH2O43255 324 aa10.46□□□□□ -0.73
ITGAV-208ENST00000496854 EIF4A1P60842 406 aaKnown RBP10.46□□□□□ -0.73
ITGAV-208ENST00000496854 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.73
ITGAV-208ENST00000496854 TPTE2Q6XPS3 522 aa10.46□□□□□ -0.73
ITGAV-208ENST00000496854 NGEFQ8N5V2 710 aa10.46□□□□□ -0.73
ITGAV-208ENST00000496854 DUOX1Q9NRD9 1551 aa10.46□□□□□ -0.74
ITGAV-208ENST00000496854 DDX60Q8IY21 1712 aaKnown RBP10.46□□□□□ -0.74
ITGAV-208ENST00000496854 COL4A1P02462 1669 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 FZD9O00144 591 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 FOXN1O15353 648 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 NTSR2O95665 410 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 MYL6BP14649 208 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 GPTP24298 496 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 EPHX2P34913 555 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 HACL1Q9UJ83 578 aa10.45□□□□□ -0.74
ITGAV-208ENST00000496854 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms