RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
ATPAF2-208ENST00000496852 HAUS7Q99871 368 aa17.02■□□□□ 0.32
ATPAF2-208ENST00000496852 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
ATPAF2-208ENST00000496852 PDS5AQ29RF7 1337 aaKnown RBP17.02■□□□□ 0.31
ATPAF2-208ENST00000496852 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 ECE2O60344 883 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 GPR162Q16538 588 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 PODNQ7Z5L7 613 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 SPATA5Q8NB90 893 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
ATPAF2-208ENST00000496852 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
ATPAF2-208ENST00000496852 ZAP70P43403 619 aa17■□□□□ 0.31
ATPAF2-208ENST00000496852 SNRKQ9NRH2 765 aa17■□□□□ 0.31
ATPAF2-208ENST00000496852 G3V3G9 751 aa16.99■□□□□ 0.31
ATPAF2-208ENST00000496852 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
ATPAF2-208ENST00000496852 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
ATPAF2-208ENST00000496852 DNAJC2Q99543 621 aaKnown RBP16.99■□□□□ 0.31
ATPAF2-208ENST00000496852 FAM205AQ6ZU69 1335 aa16.99■□□□□ 0.31
ATPAF2-208ENST00000496852 YDJCA8MPS7 323 aa16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 PAG1Q9NWQ8 432 aa16.98■□□□□ 0.31
ATPAF2-208ENST00000496852 LMNB1P20700 586 aa16.97■□□□□ 0.31
ATPAF2-208ENST00000496852 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
ATPAF2-208ENST00000496852 ANTXR1Q9H6X2 564 aa16.97■□□□□ 0.31
ATPAF2-208ENST00000496852 GOLIM4O00461 696 aa16.97■□□□□ 0.31
ATPAF2-208ENST00000496852 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
ATPAF2-208ENST00000496852 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 SDSP20132 328 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 GTF2IP78347 998 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 JAG2Q9Y219 1238 aa16.96■□□□□ 0.31
ATPAF2-208ENST00000496852 UTRNP46939 3433 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 TTF1Q15361 905 aaPredicted RBP16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 PIH1D3Q9NQM4 214 aaKnown RBP16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
ATPAF2-208ENST00000496852 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 RILPL2Q969X0 211 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 FZD9O00144 591 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 CDK5RAP2Q96SN8 1893 aa16.94■□□□□ 0.3
ATPAF2-208ENST00000496852 ECM29Q5VYK3 1845 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 DACT2Q5SW24 774 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
ATPAF2-208ENST00000496852 CXCL9Q07325 125 aa16.92■□□□□ 0.3
ATPAF2-208ENST00000496852 MFSD14BQ5SR56 506 aa16.92■□□□□ 0.3
ATPAF2-208ENST00000496852 CERS5Q8N5B7 392 aa16.92■□□□□ 0.3
ATPAF2-208ENST00000496852 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
ATPAF2-208ENST00000496852 RAD17O75943 681 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 PSMD14O00487 310 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 PRDX5P30044 214 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 GRIK5Q16478 980 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 MXD3Q9BW11 206 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 LRP2BPQ9P2M1 347 aa16.91■□□□□ 0.3
ATPAF2-208ENST00000496852 IGSF3O75054 1194 aa16.9■□□□□ 0.3
ATPAF2-208ENST00000496852 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-208ENST00000496852 SPTY2D1Q68D10 685 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-208ENST00000496852 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
ATPAF2-208ENST00000496852 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
ATPAF2-208ENST00000496852 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 MAP3K12Q12852 859 aa16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 ZNF384Q8TF68 577 aa16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
ATPAF2-208ENST00000496852 CHGBP05060 677 aa16.88■□□□□ 0.29
ATPAF2-208ENST00000496852 ADD2P35612 726 aa16.88■□□□□ 0.29
ATPAF2-208ENST00000496852 TNIP1Q15025 636 aa16.88■□□□□ 0.29
ATPAF2-208ENST00000496852 NSUN4Q96CB9 384 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms