RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
PHGDH-207ENST00000496756 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
PHGDH-207ENST00000496756 R3HDMLQ9H3Y0 253 aa16.55■□□□□ 0.24
PHGDH-207ENST00000496756 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
PHGDH-207ENST00000496756 OTOP1Q7RTM1 612 aa16.54■□□□□ 0.24
PHGDH-207ENST00000496756 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-207ENST00000496756 CENPFP49454 3210 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-207ENST00000496756 PRKG1Q13976 671 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 FBXW7Q969H0 707 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-207ENST00000496756 MYD88Q99836 296 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 COA1Q9GZY4 146 aa16.53■□□□□ 0.24
PHGDH-207ENST00000496756 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
PHGDH-207ENST00000496756 KIAA0100Q14667 2235 aaKnown RBP16.52■□□□□ 0.24
PHGDH-207ENST00000496756 SASH1O94885 1247 aa16.52■□□□□ 0.24
PHGDH-207ENST00000496756 ZBTB48P10074 688 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-207ENST00000496756 ERO1AQ96HE7 468 aa16.52■□□□□ 0.24
PHGDH-207ENST00000496756 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-207ENST00000496756 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-207ENST00000496756 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
PHGDH-207ENST00000496756 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
PHGDH-207ENST00000496756 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
PHGDH-207ENST00000496756 MINPP1Q9UNW1 487 aa16.51■□□□□ 0.23
PHGDH-207ENST00000496756 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
PHGDH-207ENST00000496756 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
PHGDH-207ENST00000496756 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-207ENST00000496756 RLBP1P12271 317 aa16.5■□□□□ 0.23
PHGDH-207ENST00000496756 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
PHGDH-207ENST00000496756 CTSWP56202 376 aa16.5■□□□□ 0.23
PHGDH-207ENST00000496756 MAP3K11Q16584 847 aa16.5■□□□□ 0.23
PHGDH-207ENST00000496756 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
PHGDH-207ENST00000496756 ITPRIPQ8IWB1 547 aa16.5■□□□□ 0.23
PHGDH-207ENST00000496756 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-207ENST00000496756 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
PHGDH-207ENST00000496756 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
PHGDH-207ENST00000496756 ARMC5Q96C12 935 aa16.49■□□□□ 0.23
PHGDH-207ENST00000496756 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-207ENST00000496756 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
PHGDH-207ENST00000496756 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
PHGDH-207ENST00000496756 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
PHGDH-207ENST00000496756 WTIPA6NIX2 430 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-207ENST00000496756 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
PHGDH-207ENST00000496756 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-207ENST00000496756 ZBED3Q96IU2 234 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-207ENST00000496756 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
PHGDH-207ENST00000496756 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
PHGDH-207ENST00000496756 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
PHGDH-207ENST00000496756 PPP2R3BQ9Y5P8 575 aa16.48■□□□□ 0.23
PHGDH-207ENST00000496756 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-207ENST00000496756 IGF2BP3O00425 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
PHGDH-207ENST00000496756 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
PHGDH-207ENST00000496756 SUPT20HL1Q3ZLR7 823 aa16.47■□□□□ 0.23
PHGDH-207ENST00000496756 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
PHGDH-207ENST00000496756 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
PHGDH-207ENST00000496756 BRCA2P51587 3418 aa16.47■□□□□ 0.23
PHGDH-207ENST00000496756 LAMB1P07942 1786 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-207ENST00000496756 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 DLGAP5Q15398 846 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 ANKRD2Q9GZV1 360 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 GREM2Q9H772 168 aa16.46■□□□□ 0.23
PHGDH-207ENST00000496756 MYO1BO43795 1136 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
PHGDH-207ENST00000496756 GTF2IP78347 998 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 SP3Q02447 781 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 CRHR2Q13324 411 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-207ENST00000496756 FZD1Q9UP38 647 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 MYH3P11055 1940 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 ZNF804BA4D1E1 1349 aa16.45■□□□□ 0.22
PHGDH-207ENST00000496756 IREB2P48200 963 aaKnown RBP16.44■□□□□ 0.22
PHGDH-207ENST00000496756 MTMR14Q8NCE2 650 aa16.44■□□□□ 0.22
PHGDH-207ENST00000496756 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
PHGDH-207ENST00000496756 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
PHGDH-207ENST00000496756 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
PHGDH-207ENST00000496756 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-207ENST00000496756 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
PHGDH-207ENST00000496756 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
PHGDH-207ENST00000496756 KCNJ4P48050 445 aa16.42■□□□□ 0.22
PHGDH-207ENST00000496756 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
PHGDH-207ENST00000496756 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
PHGDH-207ENST00000496756 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
PHGDH-207ENST00000496756 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-207ENST00000496756 CEP290O15078 2479 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-207ENST00000496756 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-207ENST00000496756 FLIIQ13045 1269 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 CD209Q9NNX6 404 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
PHGDH-207ENST00000496756 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms