RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 H3BQV1 296 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 NTSR2O95665 410 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 FGAP02671 866 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 SLC5A1P13866 664 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 CLCN1P35523 988 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 IFFO2Q5TF58 517 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 DDX11Q96FC9 970 aa15.39■□□□□ 0.05
GARNL3-220ENST00000496711 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
GARNL3-220ENST00000496711 PIH1D3Q9NQM4 214 aaKnown RBP15.39■□□□□ 0.05
GARNL3-220ENST00000496711 PTPDC1A2A3K4 754 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 HAND2P61296 217 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 RESTQ13127 1097 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 CCDC152Q4G0S7 254 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 SLC9C2Q5TAH2 1124 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 RNF214Q8ND24 703 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 MPHOSPH8Q99549 860 aa15.38■□□□□ 0.05
GARNL3-220ENST00000496711 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 TIAM2Q8IVF5 1701 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 BTAF1O14981 1849 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 CTDNEP1O95476 244 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 PDIA3P30101 505 aaKnown RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 EVCP57679 992 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 NAA16Q6N069 864 aaPredicted RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 NCOA7Q8NI08 942 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 SPATA32Q96LK8 384 aa15.37■□□□□ 0.05
GARNL3-220ENST00000496711 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
GARNL3-220ENST00000496711 WDR19Q8NEZ3 1342 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 ZNF213O14771 459 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 TOM1O60784 492 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 PDE6AP16499 860 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 MCM5P33992 734 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
GARNL3-220ENST00000496711 RALYLQ86SE5 291 aaKnown RBP15.36■□□□□ 0.05
GARNL3-220ENST00000496711 SEC31BQ9NQW1 1179 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-220ENST00000496711 COL24A1Q17RW2 1714 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 COL4A1P02462 1669 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 NHSQ6T4R5 1651 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
GARNL3-220ENST00000496711 PRC1O43663 620 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
GARNL3-220ENST00000496711 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 HS1BP3Q53T59 392 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 LEO1Q8WVC0 666 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-220ENST00000496711 KCNQ2O43526 872 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 SPATA5Q8NB90 893 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 NCOA5Q9HCD5 579 aaKnown RBP15.35■□□□□ 0.05
GARNL3-220ENST00000496711 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 BCL9LQ86UU0 1499 aa15.35■□□□□ 0.05
GARNL3-220ENST00000496711 TAF1P21675 1872 aa15.34■□□□□ 0.05
GARNL3-220ENST00000496711 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
GARNL3-220ENST00000496711 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
GARNL3-220ENST00000496711 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
GARNL3-220ENST00000496711 MYH13Q9UKX3 1938 aa15.34■□□□□ 0.05
GARNL3-220ENST00000496711 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.05
GARNL3-220ENST00000496711 ANTXR2P58335 489 aa15.33■□□□□ 0.05
GARNL3-220ENST00000496711 RASGRF1Q13972 1273 aa15.33■□□□□ 0.05
GARNL3-220ENST00000496711 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.05
GARNL3-220ENST00000496711 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.05
GARNL3-220ENST00000496711 FUCA2Q9BTY2 467 aa15.33■□□□□ 0.05
GARNL3-220ENST00000496711 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.05
GARNL3-220ENST00000496711 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 ZMYM6O95789 1325 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 GIMAP6Q6P9H5 292 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 NBPF3Q9H094 633 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
GARNL3-220ENST00000496711 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 GOLGA8BA8MQT2 603 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 TRDNQ13061 729 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 VPS72Q15906 364 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
GARNL3-220ENST00000496711 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 TAF1LQ8IZX4 1826 aa15.32■□□□□ 0.04
GARNL3-220ENST00000496711 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
GARNL3-220ENST00000496711 APPP05067 770 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 LIG1P18858 919 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 FOSBP53539 338 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 TBC1D10CQ8IV04 446 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
GARNL3-220ENST00000496711 CHRNDQ07001 517 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 MAGEB6Q8N7X4 407 aa15.31■□□□□ 0.04
GARNL3-220ENST00000496711 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
GARNL3-220ENST00000496711 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
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