RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 SCARF1Q14162 830 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 SSH3Q8TE77 659 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 IQSEC3Q9UPP2 1182 aaPredicted RBP20.06■□□□□ 0.8
DNMT3A-215ENST00000496570 IFIT1P09914 478 aaKnown RBP20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 GGA3Q9NZ52 723 aa20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
DNMT3A-215ENST00000496570 SLC5A1P13866 664 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 TFCP2Q12800 502 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 CAVIN4Q5BKX8 364 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
DNMT3A-215ENST00000496570 ADM5C9JUS6 153 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 WNT10BO00744 389 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 MS4A1P11836 297 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 MMP14P50281 582 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 GRIK5Q16478 980 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 ANGEL2Q5VTE6 544 aaKnown RBP20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
DNMT3A-215ENST00000496570 ADORA1P30542 326 aa20.02■□□□□ 0.8
DNMT3A-215ENST00000496570 MFSD14BQ5SR56 506 aa20.02■□□□□ 0.8
DNMT3A-215ENST00000496570 CEP85Q6P2H3 762 aa20.02■□□□□ 0.8
DNMT3A-215ENST00000496570 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
DNMT3A-215ENST00000496570 VPS37DQ86XT2 251 aa20.02■□□□□ 0.8
DNMT3A-215ENST00000496570 PCNTO95613 3336 aa20.02■□□□□ 0.79
DNMT3A-215ENST00000496570 AOX1Q06278 1338 aa20.02■□□□□ 0.79
DNMT3A-215ENST00000496570 CNTNAP1P78357 1384 aa20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 JMYQ8N9B5 988 aa20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 DCPSQ96C86 337 aaKnown RBP20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 ZBTB40Q9NUA8 1239 aa20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 PITPNM2Q9BZ72 1349 aa20.01■□□□□ 0.79
DNMT3A-215ENST00000496570 F8W031 263 aaPredicted RBP20■□□□□ 0.79
DNMT3A-215ENST00000496570 TIMM10P62072 90 aa20■□□□□ 0.79
DNMT3A-215ENST00000496570 PDE3AQ14432 1141 aa20■□□□□ 0.79
DNMT3A-215ENST00000496570 HDAC9Q9UKV0 1011 aa20■□□□□ 0.79
DNMT3A-215ENST00000496570 SCAF8Q9UPN6 1271 aaKnown RBP20■□□□□ 0.79
DNMT3A-215ENST00000496570 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
DNMT3A-215ENST00000496570 A0A1B0GUL7 405 aa19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 RASSF10A6NK89 507 aa19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 ZBTB22O15209 634 aa19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 CELF2O95319 508 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 PHKA1P46020 1223 aa19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 MKRN1Q9UHC7 482 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-215ENST00000496570 ECM29Q5VYK3 1845 aa19.98■□□□□ 0.79
DNMT3A-215ENST00000496570 TLL2Q9Y6L7 1015 aa19.98■□□□□ 0.79
DNMT3A-215ENST00000496570 SPDYE2BA6NHP3 402 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 SPDYE6P0CI01 402 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 G3BP1Q13283 466 aaKnown RBP eCLIP19.97■□□□□ 0.794e-6■□□□□ 9.2
DNMT3A-215ENST00000496570 CFAP100Q494V2 611 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 CCDC102BQ68D86 513 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 SULF1Q8IWU6 871 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 SIRT2Q8IXJ6 389 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 PRMT6Q96LA8 375 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-215ENST00000496570 FRAT2O75474 233 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 DLGAP5Q15398 846 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 SAPCD2Q86UD0 394 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 TBC1D22AQ8WUA7 517 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 CDCA5Q96FF9 252 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 ZNF408Q9H9D4 720 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 AKAP2Q9Y2D5 859 aa19.96■□□□□ 0.79
DNMT3A-215ENST00000496570 SURF6O75683 361 aaKnown RBP19.95■□□□□ 0.78
DNMT3A-215ENST00000496570 VEGFBP49765 207 aa19.95■□□□□ 0.78
DNMT3A-215ENST00000496570 SERPINA10Q9UK55 444 aa19.95■□□□□ 0.78
DNMT3A-215ENST00000496570 RASGRF1Q13972 1273 aa19.94■□□□□ 0.78
DNMT3A-215ENST00000496570 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.94■□□□□ 0.78
DNMT3A-215ENST00000496570 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
DNMT3A-215ENST00000496570 SEMA3EO15041 775 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 CRKP46108 304 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 DEFB115Q30KQ5 88 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 PRAMEF18Q5VWM3 479 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 THSD7BQ9C0I4 1608 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 SALL1Q9NSC2 1324 aa19.93■□□□□ 0.78
DNMT3A-215ENST00000496570 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 TNNI3KQ59H18 835 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 RPAP2Q8IXW5 612 aaPredicted RBP19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 WDR66Q8TBY9 1149 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 NEUROD6Q96NK8 337 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 GNL3LQ9NVN8 582 aaKnown RBP19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 DENND2AQ9ULE3 1009 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 SUGT1Q9Y2Z0 365 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 FPGT-TNNI3KV9GXZ4 949 aa19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 PDS5AQ29RF7 1337 aaKnown RBP19.92■□□□□ 0.78
DNMT3A-215ENST00000496570 CLRN2A0PK11 232 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms