RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PDS5AQ29RF7 1337 aaKnown RBP26.55■■□□□ 1.84
C9orf3-222ENST00000496567 MCAMP43121 646 aa26.54■■□□□ 1.84
C9orf3-222ENST00000496567 EIF6P56537 245 aaKnown RBP26.54■■□□□ 1.84
C9orf3-222ENST00000496567 GLRX3O76003 335 aaKnown RBP26.54■■□□□ 1.84
C9orf3-222ENST00000496567 TTLL5Q6EMB2 1281 aa26.54■■□□□ 1.84
C9orf3-222ENST00000496567 SPATA5Q8NB90 893 aa26.54■■□□□ 1.84
C9orf3-222ENST00000496567 HMG20BQ9P0W2 317 aa26.54■■□□□ 1.84
C9orf3-222ENST00000496567 MYH13Q9UKX3 1938 aa26.54■■□□□ 1.84
C9orf3-222ENST00000496567 FAM205AQ6ZU69 1335 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 ZC3H4Q9UPT8 1303 aaKnown RBP26.53■■□□□ 1.84
C9orf3-222ENST00000496567 USP17L3A6NCW0 530 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 USP17L4A6NCW7 530 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 GTF2IP78347 998 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 STRIP1Q5VSL9 837 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 TSHZ3Q63HK5 1081 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 USP17L1Q7RTZ2 530 aa26.53■■□□□ 1.84
C9orf3-222ENST00000496567 CHAF1AQ13111 956 aaPredicted RBP26.52■■□□□ 1.84
C9orf3-222ENST00000496567 SCARF1Q14162 830 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 WDR66Q8TBY9 1149 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 PI4K2BQ8TCG2 481 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 FBXW7Q969H0 707 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 BOLA2Q9H3K6 86 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 KCNQ5Q9NR82 932 aa26.52■■□□□ 1.84
C9orf3-222ENST00000496567 TNIP1Q15025 636 aa26.51■■□□□ 1.83
C9orf3-222ENST00000496567 CIAPIN1Q6FI81 312 aa26.51■■□□□ 1.83
C9orf3-222ENST00000496567 TBC1D22AQ8WUA7 517 aa26.51■■□□□ 1.83
C9orf3-222ENST00000496567 TIAM2Q8IVF5 1701 aa26.51■■□□□ 1.83
C9orf3-222ENST00000496567 RAD17O75943 681 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 CXCL9Q07325 125 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 HAUS7Q99871 368 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 SNRKQ9NRH2 765 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 SCN9AQ15858 1988 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 PI16Q6UXB8 463 aa26.5■■□□□ 1.83
C9orf3-222ENST00000496567 COL1A1P02452 1464 aaPredicted RBP26.49■■□□□ 1.83
C9orf3-222ENST00000496567 AKAP11Q9UKA4 1901 aa26.49■■□□□ 1.83
C9orf3-222ENST00000496567 ZAP70P43403 619 aa26.49■■□□□ 1.83
C9orf3-222ENST00000496567 ZGPATQ8N5A5 531 aaKnown RBP26.49■■□□□ 1.83
C9orf3-222ENST00000496567 DNAJC2Q99543 621 aaKnown RBP26.49■■□□□ 1.83
C9orf3-222ENST00000496567 JAG2Q9Y219 1238 aa26.49■■□□□ 1.83
C9orf3-222ENST00000496567 PSME4Q14997 1843 aa26.49■■□□□ 1.83
C9orf3-222ENST00000496567 PSMD14O00487 310 aa26.48■■□□□ 1.83
C9orf3-222ENST00000496567 VIL1P09327 827 aaKnown RBP26.48■■□□□ 1.83
C9orf3-222ENST00000496567 FKBP1AP62942 108 aaKnown RBP26.48■■□□□ 1.83
C9orf3-222ENST00000496567 DACT2Q5SW24 774 aa26.48■■□□□ 1.83
C9orf3-222ENST00000496567 SALL1Q9NSC2 1324 aa26.48■■□□□ 1.83
C9orf3-222ENST00000496567 RGS3P49796 1198 aa26.47■■□□□ 1.83
C9orf3-222ENST00000496567 MFSD14BQ5SR56 506 aa26.47■■□□□ 1.83
C9orf3-222ENST00000496567 TTF1Q15361 905 aaPredicted RBP26.46■■□□□ 1.83
C9orf3-222ENST00000496567 MYO3BQ8WXR4 1341 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 ZNF541Q9H0D2 1346 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 CYP2E1P05181 493 aaPredicted RBP26.46■■□□□ 1.83
C9orf3-222ENST00000496567 DPY19L2Q6NUT2 758 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 RSBN1LQ6PCB5 846 aaPredicted RBP26.46■■□□□ 1.83
C9orf3-222ENST00000496567 SKAP1Q86WV1 359 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 PAG1Q9NWQ8 432 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 NDUFB9Q9Y6M9 179 aa26.46■■□□□ 1.83
C9orf3-222ENST00000496567 SPTY2D1Q68D10 685 aaPredicted RBP26.45■■□□□ 1.82
C9orf3-222ENST00000496567 GPC2Q8N158 579 aa26.45■■□□□ 1.82
C9orf3-222ENST00000496567 GOLIM4O00461 696 aa26.44■■□□□ 1.82
C9orf3-222ENST00000496567 ABCF2Q9UG63 623 aa26.44■■□□□ 1.82
C9orf3-222ENST00000496567 SUGT1Q9Y2Z0 365 aa26.44■■□□□ 1.82
C9orf3-222ENST00000496567 GJA3Q9Y6H8 435 aa26.44■■□□□ 1.82
C9orf3-222ENST00000496567 TTC22Q5TAA0 569 aa26.43■■□□□ 1.82
C9orf3-222ENST00000496567 AGBL3Q8NEM8 1001 aa26.43■■□□□ 1.82
C9orf3-222ENST00000496567 ZNF646O15015 1829 aaPredicted RBP26.42■■□□□ 1.82
C9orf3-222ENST00000496567 IGSF3O75054 1194 aa26.42■■□□□ 1.82
C9orf3-222ENST00000496567 RPS12P25398 132 aaKnown RBP26.42■■□□□ 1.82
C9orf3-222ENST00000496567 LRP2BPQ9P2M1 347 aa26.42■■□□□ 1.82
C9orf3-222ENST00000496567 LDHBP07195 334 aaKnown RBP26.41■■□□□ 1.82
C9orf3-222ENST00000496567 TBC1D9Q6ZT07 1266 aa26.41■■□□□ 1.82
C9orf3-222ENST00000496567 ERICH6Q7L0X2 663 aa26.41■■□□□ 1.82
C9orf3-222ENST00000496567 CERS5Q8N5B7 392 aa26.41■■□□□ 1.82
C9orf3-222ENST00000496567 MXD3Q9BW11 206 aa26.41■■□□□ 1.82
C9orf3-222ENST00000496567 ANTXR1Q9H6X2 564 aa26.41■■□□□ 1.82
C9orf3-222ENST00000496567 MAP4K4O95819 1239 aaPredicted RBP26.41■■□□□ 1.82
C9orf3-222ENST00000496567 EDC3Q96F86 508 aaKnown RBP26.41■■□□□ 1.82
C9orf3-222ENST00000496567 TRIM6-TRIM34B2RNG4 842 aa26.4■■□□□ 1.82
C9orf3-222ENST00000496567 CNTROBQ8N137 903 aa26.4■■□□□ 1.82
C9orf3-222ENST00000496567 EVI5LQ96CN4 794 aa26.4■■□□□ 1.82
C9orf3-222ENST00000496567 PIH1D3Q9NQM4 214 aaKnown RBP26.4■■□□□ 1.82
C9orf3-222ENST00000496567 ZBTB12Q9Y330 459 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-222ENST00000496567 GLTPD2A6NH11 291 aa26.39■■□□□ 1.82
C9orf3-222ENST00000496567 DPF2Q92785 391 aa26.39■■□□□ 1.82
C9orf3-222ENST00000496567 GMLQ99445 158 aa26.39■■□□□ 1.82
C9orf3-222ENST00000496567 MAST3O60307 1309 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 IDH1O75874 414 aaKnown RBP26.38■■□□□ 1.81
C9orf3-222ENST00000496567 DDNO94850 711 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-222ENST00000496567 PRDX5P30044 214 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 MMP14P50281 582 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 MAP3K12Q12852 859 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 KBTBD3Q8NAB2 608 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 RAI14Q9P0K7 980 aa26.38■■□□□ 1.81
C9orf3-222ENST00000496567 GSPT1P15170 499 aaKnown RBP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 GMPSP49915 693 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 KIAA0825Q8IV33 1275 aa26.37■■□□□ 1.81
C9orf3-222ENST00000496567 RILPL2Q969X0 211 aa26.37■■□□□ 1.81
C9orf3-222ENST00000496567 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 LRRFIP1Q32MZ4 808 aaKnown RBP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 TMED8Q6PL24 325 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 DZIP1Q86YF9 867 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms