RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 PI16Q6UXB8 463 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-216ENST00000496466 CCDC87Q9NVE4 849 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 CFAP45Q9UL16 551 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 NR1I2O75469 434 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 ADD1P35611 737 aaKnown RBP17.56■□□□□ 0.4
UBXN11-216ENST00000496466 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
UBXN11-216ENST00000496466 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 LOC102724428A0A0B4J2F2 783 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
UBXN11-216ENST00000496466 ZAP70P43403 619 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 SIK1P57059 783 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 ITPK1Q13572 414 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
UBXN11-216ENST00000496466 CHST3Q7LGC8 479 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 ZNF274Q96GC6 653 aaPredicted RBP17.55■□□□□ 0.4
UBXN11-216ENST00000496466 SLIT2O94813 1529 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 FOSBP53539 338 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
UBXN11-216ENST00000496466 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
UBXN11-216ENST00000496466 MYH15Q9Y2K3 1946 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 FOXP2O15409 715 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 SUSD4Q5VX71 490 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-216ENST00000496466 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
UBXN11-216ENST00000496466 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-216ENST00000496466 NWD2Q9ULI1 1742 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 ANO6Q4KMQ2 910 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 FBXL16Q8N461 479 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 KCNQ2O43526 872 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 CEBPZQ03701 1054 aaKnown RBP17.53■□□□□ 0.4
UBXN11-216ENST00000496466 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 RCOR1Q9UKL0 485 aa17.53■□□□□ 0.4
UBXN11-216ENST00000496466 MCAMP43121 646 aa17.52■□□□□ 0.4
UBXN11-216ENST00000496466 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBXN11-216ENST00000496466 SASS6Q6UVJ0 657 aa17.52■□□□□ 0.4
UBXN11-216ENST00000496466 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
UBXN11-216ENST00000496466 MYH3P11055 1940 aa17.52■□□□□ 0.39
UBXN11-216ENST00000496466 PDE8BO95263 885 aa17.52■□□□□ 0.39
UBXN11-216ENST00000496466 EVCP57679 992 aa17.52■□□□□ 0.39
UBXN11-216ENST00000496466 APPBP2Q92624 585 aa17.52■□□□□ 0.39
UBXN11-216ENST00000496466 GPHNQ9NQX3 736 aaPredicted RBP17.52■□□□□ 0.39
UBXN11-216ENST00000496466 ABCC12Q96J65 1359 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 UQCRHLA0A096LP55 91 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 CAMTA2O94983 1202 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 FGAP02671 866 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 UQCRHP07919 91 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 HAND2P61296 217 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
UBXN11-216ENST00000496466 HELBQ8NG08 1087 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-216ENST00000496466 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
UBXN11-216ENST00000496466 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
UBXN11-216ENST00000496466 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
UBXN11-216ENST00000496466 PPFIA3O75145 1194 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 SPC24Q8NBT2 197 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 TPM3P06753 285 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 FDPSP14324 419 aaKnown RBP17.5■□□□□ 0.39
UBXN11-216ENST00000496466 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 C17orf53Q8N3J3 647 aaPredicted RBP17.5■□□□□ 0.39
UBXN11-216ENST00000496466 USP28Q96RU2 1077 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
UBXN11-216ENST00000496466 KCNF1Q9H3M0 494 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
UBXN11-216ENST00000496466 GUCY1B3Q02153 619 aa17.49■□□□□ 0.39
UBXN11-216ENST00000496466 ILDR1Q86SU0 546 aaPredicted RBP17.49■□□□□ 0.39
UBXN11-216ENST00000496466 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
UBXN11-216ENST00000496466 SPTLC3Q9NUV7 552 aa17.49■□□□□ 0.39
UBXN11-216ENST00000496466 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
UBXN11-216ENST00000496466 CCAR1Q8IX12 1150 aaKnown RBP17.49■□□□□ 0.39
UBXN11-216ENST00000496466 MB21D2Q8IYB1 491 aaPredicted RBP17.49■□□□□ 0.39
UBXN11-216ENST00000496466 MYH7P12883 1935 aa17.49■□□□□ 0.39
UBXN11-216ENST00000496466 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 PRC1O43663 620 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 TOM1O60784 492 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 PHKA1P46020 1223 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 TDRD7Q8NHU6 1098 aaKnown RBP17.48■□□□□ 0.39
UBXN11-216ENST00000496466 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
UBXN11-216ENST00000496466 GPAA1O43292 621 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 CCDC102BQ68D86 513 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 AK7Q96M32 723 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 DNAJC25Q9H1X3 360 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 GOLPH3LQ9H4A5 285 aa17.48■□□□□ 0.39
UBXN11-216ENST00000496466 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBXN11-216ENST00000496466 SNAP23O00161 211 aa17.47■□□□□ 0.39
UBXN11-216ENST00000496466 DNTTIP2Q5QJE6 756 aaKnown RBP17.47■□□□□ 0.39
UBXN11-216ENST00000496466 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-216ENST00000496466 PIH1D3Q9NQM4 214 aaKnown RBP17.47■□□□□ 0.39
UBXN11-216ENST00000496466 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
UBXN11-216ENST00000496466 ZNF165P49910 485 aa17.47■□□□□ 0.39
UBXN11-216ENST00000496466 ANTXR2P58335 489 aa17.47■□□□□ 0.39
UBXN11-216ENST00000496466 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms