RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
RN7SL564P-201ENST00000496309 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
RN7SL564P-201ENST00000496309 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
RN7SL564P-201ENST00000496309 COL1A1P02452 1464 aaPredicted RBP17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 HMMRO75330 724 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 FSTL1Q12841 308 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 KIAA0825Q8IV33 1275 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
RN7SL564P-201ENST00000496309 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
RN7SL564P-201ENST00000496309 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
RN7SL564P-201ENST00000496309 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
RN7SL564P-201ENST00000496309 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
RN7SL564P-201ENST00000496309 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
RN7SL564P-201ENST00000496309 PHKA1P46020 1223 aa17.18■□□□□ 0.34
RN7SL564P-201ENST00000496309 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
RN7SL564P-201ENST00000496309 MAP1SQ66K74 1059 aaPredicted RBP17.18■□□□□ 0.34
RN7SL564P-201ENST00000496309 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
RN7SL564P-201ENST00000496309 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
RN7SL564P-201ENST00000496309 APBB1O00213 710 aa17.16■□□□□ 0.34
RN7SL564P-201ENST00000496309 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
RN7SL564P-201ENST00000496309 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
RN7SL564P-201ENST00000496309 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
RN7SL564P-201ENST00000496309 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
RN7SL564P-201ENST00000496309 GRIK5Q16478 980 aa17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 GORABQ5T7V8 394 aa17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 ASTN2O75129 1339 aaPredicted RBP17.15■□□□□ 0.34
RN7SL564P-201ENST00000496309 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 DBNDD2Q9BQY9 259 aa17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 TLR7Q9NYK1 1049 aaKnown RBP17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
RN7SL564P-201ENST00000496309 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 SCARF1Q14162 830 aa17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 ZC3H15Q8WU90 426 aaKnown RBP17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 CCDC8Q9H0W5 538 aaPredicted RBP17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
RN7SL564P-201ENST00000496309 SEMA3EO15041 775 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 ITGBL1O95965 494 aaPredicted RBP17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 HSPA6P17066 643 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 KIF1BPQ96EK5 621 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 PCDHAC2Q9Y5I4 1007 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
RN7SL564P-201ENST00000496309 WNT10BO00744 389 aa17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 MMP14P50281 582 aa17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 AACSQ86V21 672 aa17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
RN7SL564P-201ENST00000496309 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 TRAF5O00463 557 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 DLGAP5Q15398 846 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 TTC39AQ5SRH9 613 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
RN7SL564P-201ENST00000496309 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 ZBTB22O15209 634 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 MCAMP43121 646 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 APLP1P51693 650 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 RBM5P52756 815 aaKnown RBP eCLIP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 CCDC158Q5M9N0 1113 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 SCAF8Q9UPN6 1271 aaKnown RBP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 PDS5AQ29RF7 1337 aaKnown RBP17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
RN7SL564P-201ENST00000496309 AOX1Q06278 1338 aa17.08■□□□□ 0.32
RN7SL564P-201ENST00000496309 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.32
RN7SL564P-201ENST00000496309 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
RN7SL564P-201ENST00000496309 PRDX5P30044 214 aa17.08■□□□□ 0.32
RN7SL564P-201ENST00000496309 HTRA3P83110 453 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms