RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ERC1Q8IUD2 1116 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 TBC1D16Q8TBP0 767 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 GNAI2P04899 355 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 TRIM28Q13263 835 aaKnown RBP10.3□□□□□ -0.76
VPS13B-206ENST00000496144 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
VPS13B-206ENST00000496144 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 TEKT1Q969V4 418 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 PHAXQ9H814 394 aaKnown RBP10.3□□□□□ -0.76
VPS13B-206ENST00000496144 PRDM10Q9NQV6 1147 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 BAG3O95817 575 aa10.3□□□□□ -0.76
VPS13B-206ENST00000496144 EIF5BO60841 1220 aaKnown RBP10.29□□□□□ -0.76
VPS13B-206ENST00000496144 KCNA3P22001 575 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 STRIP1Q5VSL9 837 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 KIAA0825Q8IV33 1275 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 ERO1AQ96HE7 468 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 FZD9O00144 591 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 MYOZ2Q9NPC6 264 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 DENND2AQ9ULE3 1009 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 HLA-DOAP06340 250 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 GLIS2Q9BZE0 524 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-206ENST00000496144 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-206ENST00000496144 NEURL1BA8MQ27 555 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 SNX21Q969T3 373 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 ZFYVE28Q9HCC9 887 aa10.29□□□□□ -0.76
VPS13B-206ENST00000496144 ANGEL2Q5VTE6 544 aaKnown RBP10.28□□□□□ -0.76
VPS13B-206ENST00000496144 PLCG2P16885 1265 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 CRY2Q49AN0 593 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 LDHBP07195 334 aaKnown RBP10.28□□□□□ -0.76
VPS13B-206ENST00000496144 INHBEP58166 350 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
VPS13B-206ENST00000496144 SMARCA5O60264 1052 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-206ENST00000496144 LRP2BPQ9P2M1 347 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 ARFGEF2Q9Y6D5 1785 aa10.28□□□□□ -0.76
VPS13B-206ENST00000496144 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 CHRNDQ07001 517 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 UBE4AQ14139 1066 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 TLL2Q9Y6L7 1015 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 ATP8B2P98198 1209 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 KIF2CQ99661 725 aa10.27□□□□□ -0.76
VPS13B-206ENST00000496144 PKN2Q16513 984 aaKnown RBP10.27□□□□□ -0.77
VPS13B-206ENST00000496144 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.77
VPS13B-206ENST00000496144 LBX1P52954 281 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 PUM3Q15397 648 aaKnown RBP10.27□□□□□ -0.77
VPS13B-206ENST00000496144 CYP4F22Q6NT55 531 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
VPS13B-206ENST00000496144 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 MFSD14BQ5SR56 506 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 TMOD4Q9NZQ9 345 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 ABCF2Q9UG63 623 aa10.27□□□□□ -0.77
VPS13B-206ENST00000496144 SALL3Q9BXA9 1300 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 SEC31BQ9NQW1 1179 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 VEGFBP49765 207 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 HSCBQ8IWL3 235 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 OTUD7AQ8TE49 926 aaPredicted RBP10.26□□□□□ -0.77
VPS13B-206ENST00000496144 UBN2Q6ZU65 1347 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
VPS13B-206ENST00000496144 ABCC12Q96J65 1359 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 FKTNO75072 461 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 ADCY9O60503 1353 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 CERS3Q8IU89 383 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 RIC1Q4ADV7 1423 aa10.26□□□□□ -0.77
VPS13B-206ENST00000496144 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 SIL1Q9H173 461 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 CABP5Q9NP86 173 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 IFIT2P09913 472 aaKnown RBP10.25□□□□□ -0.77
VPS13B-206ENST00000496144 UBR3Q6ZT12 1888 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 CNTNAP1P78357 1384 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 DDIT3P35638 169 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 UBXN2AP68543 259 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
VPS13B-206ENST00000496144 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
VPS13B-206ENST00000496144 MED23Q9ULK4 1368 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 IL15P40933 162 aaPredicted RBP10.25□□□□□ -0.77
VPS13B-206ENST00000496144 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 CDCA5Q96FF9 252 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 GREM2Q9H772 168 aa10.25□□□□□ -0.77
VPS13B-206ENST00000496144 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
VPS13B-206ENST00000496144 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.25□□□□□ -0.774e-7■■■■■ 34.5
VPS13B-206ENST00000496144 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 PNMA6EA0A0J9YXQ4 647 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 POLA2Q14181 598 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 LRRCC1Q9C099 1032 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 TCP10L2B9ZVM9 353 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 SDSP20132 328 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 BEND3Q5T5X7 828 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 CASC1Q6TDU7 716 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
VPS13B-206ENST00000496144 PITPNM2Q9BZ72 1349 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms