RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 INTS5Q6P9B9 1019 aaKnown RBP8.85□□□□□ -0.99
SRRM1-219ENST00000495561 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
SRRM1-219ENST00000495561 MEGF11A6BM72 1044 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 SSFA2P28290 1259 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 ARL4DP49703 201 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 ALKBH2Q6NS38 261 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 VN1R5Q7Z5H4 357 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 KRTAP19-1Q8IUB9 90 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 SHKBP1Q8TBC3 707 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
SRRM1-219ENST00000495561 SOX1O00570 391 aaPredicted RBP8.83□□□□□ -1
SRRM1-219ENST00000495561 PHACTR2O75167 634 aa8.83□□□□□ -1
SRRM1-219ENST00000495561 TNFRSF21O75509 655 aa8.83□□□□□ -1
SRRM1-219ENST00000495561 IRAK1P51617 712 aa8.83□□□□□ -1
SRRM1-219ENST00000495561 NPR3P17342 541 aa8.82□□□□□ -1
SRRM1-219ENST00000495561 IKBKEQ14164 716 aa8.82□□□□□ -1
SRRM1-219ENST00000495561 DTX1Q86Y01 620 aa8.82□□□□□ -1
SRRM1-219ENST00000495561 SNX29Q8TEQ0 813 aa8.82□□□□□ -1
SRRM1-219ENST00000495561 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
SRRM1-219ENST00000495561 GAS2O43903 313 aaKnown RBP8.81□□□□□ -1
SRRM1-219ENST00000495561 EDN3P14138 238 aa8.81□□□□□ -1
SRRM1-219ENST00000495561 TMPRSS13Q9BYE2 586 aa8.81□□□□□ -1
SRRM1-219ENST00000495561 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
SRRM1-219ENST00000495561 MAP4P27816 1152 aaKnown RBP8.8□□□□□ -1
SRRM1-219ENST00000495561 AAMPQ13685 434 aa8.8□□□□□ -1
SRRM1-219ENST00000495561 SGO2Q562F6 1265 aa8.8□□□□□ -1
SRRM1-219ENST00000495561 USP26Q9BXU7 913 aa8.8□□□□□ -1
SRRM1-219ENST00000495561 BHLHE41Q9C0J9 482 aaPredicted RBP8.8□□□□□ -1
SRRM1-219ENST00000495561 LOC100289279A0A1B0GTE1 492 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 WDR64B1ANS9 1081 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 PAX4O43316 350 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 FZD6O60353 706 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 EHHADHQ08426 723 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
SRRM1-219ENST00000495561 ASAP3Q8TDY4 903 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 MFSD14AQ96MC6 490 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 SOX17Q9H6I2 414 aaPredicted RBP8.79□□□□□ -1
SRRM1-219ENST00000495561 LATS2Q9NRM7 1088 aa8.79□□□□□ -1
SRRM1-219ENST00000495561 FAM13AO94988 1023 aa8.78□□□□□ -1
SRRM1-219ENST00000495561 TIAF1O95411 115 aa8.78□□□□□ -1
SRRM1-219ENST00000495561 DLGAP3O95886 979 aa8.78□□□□□ -1
SRRM1-219ENST00000495561 PEAR1Q5VY43 1037 aaPredicted RBP8.78□□□□□ -1
SRRM1-219ENST00000495561 C12orf50Q8NA57 414 aaPredicted RBP8.78□□□□□ -1
SRRM1-219ENST00000495561 SUGCTQ9HAC7 445 aa8.78□□□□□ -1
SRRM1-219ENST00000495561 ESRRAP11474 423 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-219ENST00000495561 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-219ENST00000495561 HOXA10P31260 410 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-219ENST00000495561 USP5P45974 858 aa8.77□□□□□ -1.01
SRRM1-219ENST00000495561 PHLDB3Q6NSJ2 640 aa8.77□□□□□ -1.01
SRRM1-219ENST00000495561 CCDC82Q8N4S0 544 aa8.77□□□□□ -1.01
SRRM1-219ENST00000495561 AMOTL2Q9Y2J4 779 aa8.77□□□□□ -1.01
SRRM1-219ENST00000495561 WNT11O96014 354 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 RXRBP28702 533 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 GJD3Q8N144 294 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 FMNL2Q96PY5 1086 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 CYP4F12Q9HCS2 524 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 CCDC87Q9NVE4 849 aa8.76□□□□□ -1.01
SRRM1-219ENST00000495561 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
SRRM1-219ENST00000495561 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
SRRM1-219ENST00000495561 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
SRRM1-219ENST00000495561 SF3B2Q13435 895 aaKnown RBP8.75□□□□□ -1.01
SRRM1-219ENST00000495561 ZFYVE28Q9HCC9 887 aa8.75□□□□□ -1.01
SRRM1-219ENST00000495561 PIM2Q9P1W9 311 aa8.75□□□□□ -1.01
SRRM1-219ENST00000495561 F13BP05160 661 aa8.74□□□□□ -1.01
SRRM1-219ENST00000495561 DRD2P14416 443 aa8.74□□□□□ -1.01
SRRM1-219ENST00000495561 FBXL6Q8N531 539 aa8.74□□□□□ -1.01
SRRM1-219ENST00000495561 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
SRRM1-219ENST00000495561 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
SRRM1-219ENST00000495561 GSTM4Q03013 218 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
SRRM1-219ENST00000495561 EXOSC6Q5RKV6 272 aaKnown RBP8.73□□□□□ -1.01
SRRM1-219ENST00000495561 GIMAP7Q8NHV1 300 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 NRSN2Q9GZP1 204 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
SRRM1-219ENST00000495561 FAM95CA0A1B0GW59 222 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 ABL1P00519 1130 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 TXKP42681 527 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 CDPF1Q6NVV7 123 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 SHISA5Q8N114 240 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 C2CD4AQ8NCU7 369 aaPredicted RBP8.72□□□□□ -1.01
SRRM1-219ENST00000495561 FBLIM1Q8WUP2 373 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
SRRM1-219ENST00000495561 USP11P51784 963 aa8.71□□□□□ -1.02
SRRM1-219ENST00000495561 NFKBIBQ15653 356 aa8.71□□□□□ -1.02
SRRM1-219ENST00000495561 OSBPL1AQ9BXW6 950 aa8.71□□□□□ -1.02
SRRM1-219ENST00000495561 FOSL1P15407 271 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
SRRM1-219ENST00000495561 MSMPQ1L6U9 139 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 PAOXQ6QHF9 649 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 KRTAP9-9Q9BYP9 154 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 KRTAP9-4Q9BYQ2 154 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 ADGRE2Q9UHX3 823 aa8.7□□□□□ -1.02
SRRM1-219ENST00000495561 A0A096LPE4 126 aa8.69□□□□□ -1.02
SRRM1-219ENST00000495561 A0A1W2PP55 124 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms