RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
RPN1-206ENST00000495462 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
RPN1-206ENST00000495462 THSD7BQ9C0I4 1608 aa8.35□□□□□ -1.07
RPN1-206ENST00000495462 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 ECE2O60344 883 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 AOC2O75106 756 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
RPN1-206ENST00000495462 LBX1P52954 281 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 RPS8P62241 208 aaKnown RBP8.34□□□□□ -1.07
RPN1-206ENST00000495462 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 CAPNS2Q96L46 248 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 ZIC5Q96T25 663 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 METTL22Q9BUU2 404 aaPredicted RBP8.34□□□□□ -1.07
RPN1-206ENST00000495462 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 TMX4Q9H1E5 349 aaPredicted RBP8.34□□□□□ -1.07
RPN1-206ENST00000495462 MAP3K2Q9Y2U5 619 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
RPN1-206ENST00000495462 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 PCCAP05165 728 aaPredicted RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 TBC1D10BQ4KMP7 808 aaPredicted RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 RBM26Q5T8P6 1007 aaKnown RBP8.33□□□□□ -1.08
RPN1-206ENST00000495462 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 TRPM7Q96QT4 1865 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 ZNF408Q9H9D4 720 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
RPN1-206ENST00000495462 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 ADM5C9JUS6 153 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 PDE8AO60658 829 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 CTCFP49711 727 aaPredicted RBP8.32□□□□□ -1.08
RPN1-206ENST00000495462 TNIP1Q15025 636 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 CCDC30Q5VVM6 783 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 CWC25Q9NXE8 425 aaPredicted RBP8.32□□□□□ -1.08
RPN1-206ENST00000495462 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
RPN1-206ENST00000495462 SCAF8Q9UPN6 1271 aaKnown RBP8.32□□□□□ -1.08
RPN1-206ENST00000495462 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
RPN1-206ENST00000495462 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 H7C1D1 291 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 UFL1O94874 794 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 TWISTNBQ3B726 338 aaPredicted RBP8.31□□□□□ -1.08
RPN1-206ENST00000495462 TXNRD3Q86VQ6 643 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
RPN1-206ENST00000495462 TTLL11Q8NHH1 800 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 DPF2Q92785 391 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 AIDAQ96BJ3 306 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 MXD3Q9BW11 206 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 GREM2Q9H772 168 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
RPN1-206ENST00000495462 SPEF2Q9C093 1822 aa8.31□□□□□ -1.08
RPN1-206ENST00000495462 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 VIL1P09327 827 aaKnown RBP8.3□□□□□ -1.08
RPN1-206ENST00000495462 KLRK1P26718 216 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 CASP7P55210 303 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 CTSWP56202 376 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 CALD1Q05682 793 aaKnown RBP8.3□□□□□ -1.08
RPN1-206ENST00000495462 CCDC27Q2M243 656 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 CCDC152Q4G0S7 254 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 ZC3H15Q8WU90 426 aaKnown RBP8.3□□□□□ -1.08
RPN1-206ENST00000495462 ZC3H12CQ9C0D7 883 aaKnown RBP8.3□□□□□ -1.08
RPN1-206ENST00000495462 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
RPN1-206ENST00000495462 FANCIQ9NVI1 1328 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 H7C1W4 665 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 SEMA3EO15041 775 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 VAMP4O75379 141 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 DDX58O95786 925 aaKnown RBP8.29□□□□□ -1.08
RPN1-206ENST00000495462 MAP2K1Q02750 393 aaPredicted RBP8.29□□□□□ -1.08
RPN1-206ENST00000495462 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 ANKRD18AQ8IVF6 992 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 GMLQ99445 158 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 EYA3Q99504 573 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 RBM27Q9P2N5 1060 aaKnown RBP8.29□□□□□ -1.08
RPN1-206ENST00000495462 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
RPN1-206ENST00000495462 POLR2AP24928 1970 aaKnown RBP8.28□□□□□ -1.08
RPN1-206ENST00000495462 FAM155AB1AL88 458 aaPredicted RBP8.28□□□□□ -1.08
RPN1-206ENST00000495462 SNAP23O00161 211 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 ECE1P42892 770 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 EXOSC9Q06265 439 aaKnown RBP8.28□□□□□ -1.08
RPN1-206ENST00000495462 FLIIQ13045 1269 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 GCKRQ14397 625 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 RSBN1LQ6PCB5 846 aaPredicted RBP8.28□□□□□ -1.08
RPN1-206ENST00000495462 KRT26Q7Z3Y9 468 aa8.28□□□□□ -1.08
RPN1-206ENST00000495462 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
RPN1-206ENST00000495462 MRS2Q9HD23 443 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms