RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 TTC21BQ7Z4L5 1316 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 SNUPNO95149 360 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 GSCP56915 257 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 NBPF14Q5TI25 921 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 FAM114A1Q8IWE2 563 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 C3orf20Q8ND61 904 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 TRIM58Q8NG06 486 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 JARID2Q92833 1246 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 HYPKQ9NX55 129 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 IQGAP1P46940 1657 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 SOX12O15370 315 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 FLOT1O75955 427 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 CYLC1P35663 651 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 ZNF569Q5MCW4 686 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 RUFY3Q7L099 469 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 WASF1Q92558 559 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 RAB3IPQ96QF0 476 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 LARSQ9P2J5 1176 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 NSFL1CQ9UNZ2 370 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 U3KPZ7 1027 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 RHOXF2BP0C7M4 288 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 CASP8Q14790 479 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 CFAP58Q5T655 872 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 RMDN2Q96LZ7 410 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 TCHPQ9BT92 498 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 PUF60Q9UHX1 559 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 LUC7L2Q9Y383 392 aaKnown RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 RIPOR2Q9Y4F9 1068 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 MAP3K5Q99683 1374 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 PLB1Q6P1J6 1458 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 WDR7Q9Y4E6 1490 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 NAA16Q6N069 864 aaPredicted RBP6.93□□□□□ -1.3
PHC3-214ENST00000494943 RUFY4Q6ZNE9 571 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 FERMT3Q86UX7 667 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 EVI5LQ96CN4 794 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■■■■ 31.6
PHC3-214ENST00000494943 ZDHHC9Q9Y397 364 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 ARHGEF5Q12774 1597 aa6.93□□□□□ -1.3
PHC3-214ENST00000494943 KRT86O43790 486 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 GYS2P54840 703 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MXRA7P84157 204 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 PRPF40BQ6NWY9 871 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 TMTC1Q8IUR5 882 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 TAF4BQ92750 862 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 FSD1Q9BTV5 496 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 IRAK4Q9NWZ3 460 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 USP16Q9Y5T5 823 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MAST1Q9Y2H9 1570 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MAGI2Q86UL8 1455 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 ASXL2Q76L83 1435 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 PHACTR2O75167 634 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 PSMD7P51665 324 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 LMNB2Q03252 620 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 G3BP1Q13283 466 aaKnown RBP eCLIP6.92□□□□□ -1.3
PHC3-214ENST00000494943 MTMR3Q13615 1198 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 RCSD1Q6JBY9 416 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 PARP9Q8IXQ6 854 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 LZICQ8WZA0 190 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 ITFG2Q969R8 447 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 TTC14Q96N46 770 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 TSC22D3Q99576 134 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 KLC4Q9NSK0 619 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MTMR6Q9Y217 621 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MRFAP1Q9Y605 127 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 PRKAR2BP31323 418 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 DDR1Q08345 913 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 CEP85Q6P2H3 762 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 MAATS1Q7Z4T9 603 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 ARHGAP18Q8N392 663 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 HOOK2Q96ED9 719 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 CALR3Q96L12 384 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 ATP10AO60312 1499 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 NUP153P49790 1475 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 ZNF518AQ6AHZ1 1483 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 SOS1Q07889 1333 aaPredicted RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 TARSL2A2RTX5 802 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 C21orf2O43822 256 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 DESP17661 470 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 AMPHP49418 695 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 ST5P78524 1137 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 CEBPZQ03701 1054 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 CYP26C1Q6V0L0 522 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 SPATA24Q86W54 205 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 CACNA2D3Q8IZS8 1091 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.92□□□□□ -1.3
PHC3-214ENST00000494943 IQCDQ96DY2 449 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 ESF1Q9H501 851 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 PHAXQ9H814 394 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 NOP53Q9NZM5 478 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 TFIP11Q9UBB9 837 aaKnown RBP6.92□□□□□ -1.3
PHC3-214ENST00000494943 NRBP1Q9UHY1 535 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 TSKSQ9UJT2 592 aa6.92□□□□□ -1.3
PHC3-214ENST00000494943 HSP90AB2PQ58FF8 381 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms