RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CAVIN4Q5BKX8 364 aa17.86■□□□□ 0.45
SCAP-213ENST00000494938 C20orf194Q5TEA3 1177 aa17.86■□□□□ 0.45
SCAP-213ENST00000494938 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
SCAP-213ENST00000494938 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
SCAP-213ENST00000494938 SSH3Q8TE77 659 aa17.86■□□□□ 0.45
SCAP-213ENST00000494938 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 SLC5A1P13866 664 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 TIMM10P62072 90 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 TFCP2Q12800 502 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 MVPQ14764 893 aaKnown RBP17.85■□□□□ 0.45
SCAP-213ENST00000494938 ATP2B3Q16720 1220 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 VPS37DQ86XT2 251 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 OGFOD1Q8N543 542 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 ZBED3Q96IU2 234 aaPredicted RBP17.85■□□□□ 0.45
SCAP-213ENST00000494938 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
SCAP-213ENST00000494938 COG6Q9Y2V7 657 aa17.85■□□□□ 0.45
SCAP-213ENST00000494938 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
SCAP-213ENST00000494938 WNT10BO00744 389 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 GRIK5Q16478 980 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 DCPSQ96C86 337 aaKnown RBP17.83■□□□□ 0.44
SCAP-213ENST00000494938 KLRG1Q96E93 195 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
SCAP-213ENST00000494938 F8W031 263 aaPredicted RBP17.82■□□□□ 0.44
SCAP-213ENST00000494938 ADORA1P30542 326 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCAP-213ENST00000494938 MFSD14BQ5SR56 506 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
SCAP-213ENST00000494938 KRT26Q7Z3Y9 468 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 GGA3Q9NZ52 723 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 HDAC9Q9UKV0 1011 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
SCAP-213ENST00000494938 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
SCAP-213ENST00000494938 ADM5C9JUS6 153 aa17.81■□□□□ 0.44
SCAP-213ENST00000494938 CHAF1AQ13111 956 aaPredicted RBP17.81■□□□□ 0.44
SCAP-213ENST00000494938 MTMR14Q8NCE2 650 aa17.81■□□□□ 0.44
SCAP-213ENST00000494938 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
SCAP-213ENST00000494938 CELF2O95319 508 aaKnown RBP17.8■□□□□ 0.44
SCAP-213ENST00000494938 PHKA1P46020 1223 aa17.8■□□□□ 0.44
SCAP-213ENST00000494938 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
SCAP-213ENST00000494938 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
SCAP-213ENST00000494938 SCAF8Q9UPN6 1271 aaKnown RBP17.8■□□□□ 0.44
SCAP-213ENST00000494938 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
SCAP-213ENST00000494938 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 ZBTB22O15209 634 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
SCAP-213ENST00000494938 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 SIRT2Q8IXJ6 389 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 XAGE2Q96GT9 111 aa17.79■□□□□ 0.44
SCAP-213ENST00000494938 PRMT6Q96LA8 375 aaPredicted RBP17.79■□□□□ 0.44
SCAP-213ENST00000494938 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 DLGAP5Q15398 846 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 CCDC102BQ68D86 513 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 SULF1Q8IWU6 871 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 JMYQ8N9B5 988 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 TBC1D22AQ8WUA7 517 aa17.78■□□□□ 0.44
SCAP-213ENST00000494938 MKRN1Q9UHC7 482 aaKnown RBP17.78■□□□□ 0.44
SCAP-213ENST00000494938 TTF2Q9UNY4 1162 aaKnown RBP17.78■□□□□ 0.44
SCAP-213ENST00000494938 AOX1Q06278 1338 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 SPDYE2BA6NHP3 402 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 RASSF10A6NK89 507 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 SPDYE6P0CI01 402 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 NEUROD6Q96NK8 337 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 TLL2Q9Y6L7 1015 aa17.77■□□□□ 0.44
SCAP-213ENST00000494938 DEFB115Q30KQ5 88 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
SCAP-213ENST00000494938 WDR66Q8TBY9 1149 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 ZNF408Q9H9D4 720 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 GNL3LQ9NVN8 582 aaKnown RBP17.76■□□□□ 0.43
SCAP-213ENST00000494938 ABT1Q9ULW3 272 aaKnown RBP17.76■□□□□ 0.43
SCAP-213ENST00000494938 SUGT1Q9Y2Z0 365 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 ZNF646O15015 1829 aaPredicted RBP17.76■□□□□ 0.43
SCAP-213ENST00000494938 PSME4Q14997 1843 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 PCNTO95613 3336 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 CNTNAP1P78357 1384 aa17.76■□□□□ 0.43
SCAP-213ENST00000494938 VEGFBP49765 207 aa17.75■□□□□ 0.43
SCAP-213ENST00000494938 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
SCAP-213ENST00000494938 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
SCAP-213ENST00000494938 CDCA5Q96FF9 252 aa17.75■□□□□ 0.43
SCAP-213ENST00000494938 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
SCAP-213ENST00000494938 SEMA3EO15041 775 aa17.74■□□□□ 0.43
SCAP-213ENST00000494938 CRKP46108 304 aa17.74■□□□□ 0.43
SCAP-213ENST00000494938 RBM5P52756 815 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCAP-213ENST00000494938 HDLBPQ00341 1268 aaKnown RBP17.74■□□□□ 0.43
SCAP-213ENST00000494938 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
SCAP-213ENST00000494938 DENND2AQ9ULE3 1009 aa17.74■□□□□ 0.43
SCAP-213ENST00000494938 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
SCAP-213ENST00000494938 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
SCAP-213ENST00000494938 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
SCAP-213ENST00000494938 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
SCAP-213ENST00000494938 COL1A1P02452 1464 aaPredicted RBP17.73■□□□□ 0.43
SCAP-213ENST00000494938 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
SCAP-213ENST00000494938 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
SCAP-213ENST00000494938 GBA2Q9HCG7 927 aaPredicted RBP17.72■□□□□ 0.43
SCAP-213ENST00000494938 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms