RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 FBXL16Q8N461 479 aa20.32■□□□□ 0.84
GABBR1-220ENST00000494877 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
GABBR1-220ENST00000494877 RBSNQ9H1K0 784 aa20.31■□□□□ 0.84
GABBR1-220ENST00000494877 JAK2O60674 1132 aa20.31■□□□□ 0.84
GABBR1-220ENST00000494877 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
GABBR1-220ENST00000494877 FAM182BQ5T319 152 aa20.31■□□□□ 0.84
GABBR1-220ENST00000494877 PIH1D3Q9NQM4 214 aaKnown RBP20.31■□□□□ 0.84
GABBR1-220ENST00000494877 ATRNO75882 1429 aa20.31■□□□□ 0.84
GABBR1-220ENST00000494877 LINC00116Q8NCU8 138 aa20.3■□□□□ 0.84
GABBR1-220ENST00000494877 LAMB2P55268 1798 aa20.3■□□□□ 0.84
GABBR1-220ENST00000494877 IDH1O75874 414 aaKnown RBP20.3■□□□□ 0.84
GABBR1-220ENST00000494877 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
GABBR1-220ENST00000494877 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
GABBR1-220ENST00000494877 BCORQ6W2J9 1755 aa20.3■□□□□ 0.84
GABBR1-220ENST00000494877 KRT85P78386 507 aa20.29■□□□□ 0.84
GABBR1-220ENST00000494877 CHMP4CQ96CF2 233 aa20.29■□□□□ 0.84
GABBR1-220ENST00000494877 ZNF274Q96GC6 653 aaPredicted RBP20.29■□□□□ 0.84
GABBR1-220ENST00000494877 CCDC173Q0VFZ6 552 aa20.29■□□□□ 0.84
GABBR1-220ENST00000494877 FERMT3Q86UX7 667 aa20.29■□□□□ 0.84
GABBR1-220ENST00000494877 SPATA5Q8NB90 893 aa20.29■□□□□ 0.84
GABBR1-220ENST00000494877 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
GABBR1-220ENST00000494877 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
GABBR1-220ENST00000494877 RGL2O15211 777 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 HAND2P61296 217 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 ZNF213O14771 459 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 PDE6AP16499 860 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 CNTNAP4Q9C0A0 1308 aa20.28■□□□□ 0.84
GABBR1-220ENST00000494877 EVCP57679 992 aa20.27■□□□□ 0.84
GABBR1-220ENST00000494877 HMGN5P82970 282 aaKnown RBP20.27■□□□□ 0.84
GABBR1-220ENST00000494877 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.84
GABBR1-220ENST00000494877 PPP1R9BQ96SB3 815 aa20.27■□□□□ 0.84
GABBR1-220ENST00000494877 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
GABBR1-220ENST00000494877 PDIA3P30101 505 aaKnown RBP20.27■□□□□ 0.83
GABBR1-220ENST00000494877 CHST3Q7LGC8 479 aa20.27■□□□□ 0.83
GABBR1-220ENST00000494877 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.83
GABBR1-220ENST00000494877 TCRBV5S4A2TA0A5A2 114 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 ELP1O95163 1332 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 LETM1O95202 739 aaPredicted RBP20.26■□□□□ 0.83
GABBR1-220ENST00000494877 MCM5P33992 734 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 PTF1AQ7RTS3 328 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 DDX11Q96FC9 970 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 CDC5LQ99459 802 aaKnown RBP20.26■□□□□ 0.83
GABBR1-220ENST00000494877 QTRT2Q9H974 415 aaKnown RBP20.26■□□□□ 0.83
GABBR1-220ENST00000494877 KIF3AQ9Y496 699 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 H3BQV1 296 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 SNAP23O00161 211 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 IFFO2Q5TF58 517 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 NCOA7Q8NI08 942 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 TSPY26PQ9H489 355 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
GABBR1-220ENST00000494877 MAP3K12Q12852 859 aa20.25■□□□□ 0.83
GABBR1-220ENST00000494877 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
GABBR1-220ENST00000494877 SCAND2PQ9GZW5 306 aaPredicted RBP20.25■□□□□ 0.83
GABBR1-220ENST00000494877 CTDNEP1O95476 244 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 CHRNDQ07001 517 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 KLHL34Q8N239 644 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 TRIM44Q96DX7 344 aaPredicted RBP20.24■□□□□ 0.83
GABBR1-220ENST00000494877 WDR19Q8NEZ3 1342 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
GABBR1-220ENST00000494877 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
GABBR1-220ENST00000494877 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
GABBR1-220ENST00000494877 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 SEPT12Q8IYM1 358 aa20.24■□□□□ 0.83
GABBR1-220ENST00000494877 ZSCAN16Q9H4T2 348 aaPredicted RBP20.24■□□□□ 0.83
GABBR1-220ENST00000494877 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
GABBR1-220ENST00000494877 PRC1O43663 620 aa20.23■□□□□ 0.83
GABBR1-220ENST00000494877 KCNQ4P56696 695 aa20.23■□□□□ 0.83
GABBR1-220ENST00000494877 SF3B3Q15393 1217 aaKnown RBP20.23■□□□□ 0.83
GABBR1-220ENST00000494877 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
GABBR1-220ENST00000494877 AIDAQ96BJ3 306 aa20.23■□□□□ 0.83
GABBR1-220ENST00000494877 NAP1L2Q9ULW6 460 aaPredicted RBP20.23■□□□□ 0.83
GABBR1-220ENST00000494877 NAA16Q6N069 864 aaPredicted RBP20.23■□□□□ 0.83
GABBR1-220ENST00000494877 STRBPQ96SI9 672 aaKnown RBP20.23■□□□□ 0.83
GABBR1-220ENST00000494877 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 DOCK2Q92608 1830 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 APPP05067 770 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 RESTQ13127 1097 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 NCOA5Q9HCD5 579 aaKnown RBP20.22■□□□□ 0.83
GABBR1-220ENST00000494877 BCAMP50895 628 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 TRDNQ13061 729 aa20.22■□□□□ 0.83
GABBR1-220ENST00000494877 ALX1Q15699 326 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 ANKRD18AQ8IVF6 992 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 MAGEB6Q8N7X4 407 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 ANTXR2P58335 489 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 SPATA32Q96LK8 384 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 NBPF3Q9H094 633 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
GABBR1-220ENST00000494877 THSD7AQ9UPZ6 1657 aa20.2■□□□□ 0.82
GABBR1-220ENST00000494877 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
GABBR1-220ENST00000494877 RRAGDQ9NQL2 400 aaPredicted RBP20.2■□□□□ 0.82
GABBR1-220ENST00000494877 GPHNQ9NQX3 736 aaPredicted RBP20.2■□□□□ 0.82
GABBR1-220ENST00000494877 ZMYM6O95789 1325 aa20.2■□□□□ 0.82
GABBR1-220ENST00000494877 BCL2L12Q9HB09 334 aa20.2■□□□□ 0.82
GABBR1-220ENST00000494877 BSDC1Q9NW68 430 aaPredicted RBP20.2■□□□□ 0.82
GABBR1-220ENST00000494877 TFIP11Q9UBB9 837 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms