RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 IGF2BP3O00425 579 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL4A2-209ENST00000494852 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
COL4A2-209ENST00000494852 SUPT20HL1Q3ZLR7 823 aa20.28■□□□□ 0.84
COL4A2-209ENST00000494852 CERS5Q8N5B7 392 aa20.28■□□□□ 0.84
COL4A2-209ENST00000494852 SSC5DA1L4H1 1573 aa20.28■□□□□ 0.84
COL4A2-209ENST00000494852 MKI67P46013 3256 aaKnown RBP20.28■□□□□ 0.84
COL4A2-209ENST00000494852 MYO1BO43795 1136 aa20.27■□□□□ 0.84
COL4A2-209ENST00000494852 FKBP1AP62942 108 aaKnown RBP20.27■□□□□ 0.84
COL4A2-209ENST00000494852 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
COL4A2-209ENST00000494852 CLMNQ96JQ2 1002 aa20.27■□□□□ 0.84
COL4A2-209ENST00000494852 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
COL4A2-209ENST00000494852 CENPFP49454 3210 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 IL1R1P14778 569 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
COL4A2-209ENST00000494852 OTUD7BQ6GQQ9 843 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 ERO1AQ96HE7 468 aa20.26■□□□□ 0.83
COL4A2-209ENST00000494852 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
COL4A2-209ENST00000494852 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
COL4A2-209ENST00000494852 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
COL4A2-209ENST00000494852 PRMT6Q96LA8 375 aaPredicted RBP20.25■□□□□ 0.83
COL4A2-209ENST00000494852 PTPN22Q9Y2R2 807 aa20.25■□□□□ 0.83
COL4A2-209ENST00000494852 POTEFA5A3E0 1075 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 IREB2P48200 963 aaKnown RBP20.24■□□□□ 0.83
COL4A2-209ENST00000494852 FLIIQ13045 1269 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 ZNF804AQ7Z570 1209 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 DNAAF4Q8WXU2 420 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 PCDHAC2Q9Y5I4 1007 aa20.24■□□□□ 0.83
COL4A2-209ENST00000494852 CLRN2A0PK11 232 aa20.23■□□□□ 0.83
COL4A2-209ENST00000494852 TESPA1A2RU30 521 aaPredicted RBP20.23■□□□□ 0.83
COL4A2-209ENST00000494852 SNAP23O00161 211 aa20.23■□□□□ 0.83
COL4A2-209ENST00000494852 TAF5LO75529 589 aa20.23■□□□□ 0.83
COL4A2-209ENST00000494852 USP2O75604 605 aaPredicted RBP20.23■□□□□ 0.83
COL4A2-209ENST00000494852 NBPF12Q5TAG4 269 aaPredicted RBP20.23■□□□□ 0.83
COL4A2-209ENST00000494852 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
COL4A2-209ENST00000494852 BRCA2P51587 3418 aa20.23■□□□□ 0.83
COL4A2-209ENST00000494852 F8W031 263 aaPredicted RBP20.22■□□□□ 0.83
COL4A2-209ENST00000494852 CRHR2Q13324 411 aa20.22■□□□□ 0.83
COL4A2-209ENST00000494852 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
COL4A2-209ENST00000494852 HABP4Q5JVS0 413 aaKnown RBP20.22■□□□□ 0.83
COL4A2-209ENST00000494852 HELBQ8NG08 1087 aaPredicted RBP20.22■□□□□ 0.83
COL4A2-209ENST00000494852 ARMC5Q96C12 935 aa20.22■□□□□ 0.83
COL4A2-209ENST00000494852 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
COL4A2-209ENST00000494852 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
COL4A2-209ENST00000494852 GJA5P36382 358 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 FOXO4P98177 505 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
COL4A2-209ENST00000494852 RASA3Q14644 834 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 CD99L2Q8TCZ2 262 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 PTPN18Q99952 460 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 EFCC1Q9HA90 598 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
COL4A2-209ENST00000494852 SP3Q02447 781 aa20.2■□□□□ 0.82
COL4A2-209ENST00000494852 IL16Q14005 1332 aa20.2■□□□□ 0.82
COL4A2-209ENST00000494852 AOX1Q06278 1338 aa20.19■□□□□ 0.82
COL4A2-209ENST00000494852 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
COL4A2-209ENST00000494852 RBM5P52756 815 aaKnown RBP eCLIP20.18■□□□□ 0.82
COL4A2-209ENST00000494852 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
COL4A2-209ENST00000494852 FAM205AQ6ZU69 1335 aa20.18■□□□□ 0.82
COL4A2-209ENST00000494852 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
COL4A2-209ENST00000494852 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
COL4A2-209ENST00000494852 OPTNQ96CV9 577 aa20.17■□□□□ 0.82
COL4A2-209ENST00000494852 MS4A4AQ96JQ5 239 aa20.17■□□□□ 0.82
COL4A2-209ENST00000494852 SERPINA10Q9UK55 444 aa20.17■□□□□ 0.82
COL4A2-209ENST00000494852 CACNA1FO60840 1977 aa20.16■□□□□ 0.82
COL4A2-209ENST00000494852 EN2P19622 333 aaPredicted RBP20.16■□□□□ 0.82
COL4A2-209ENST00000494852 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
COL4A2-209ENST00000494852 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
COL4A2-209ENST00000494852 JAG2Q9Y219 1238 aa20.16■□□□□ 0.82
COL4A2-209ENST00000494852 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
COL4A2-209ENST00000494852 KIAA0100Q14667 2235 aaKnown RBP20.15■□□□□ 0.82
COL4A2-209ENST00000494852 ANP32CO43423 234 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 CAP1Q01518 475 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 ARHGEF6Q15052 776 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 CCDC57Q2TAC2 916 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 LDHAL6AQ6ZMR3 332 aa20.15■□□□□ 0.82
COL4A2-209ENST00000494852 TDRD7Q8NHU6 1098 aaKnown RBP20.15■□□□□ 0.82
COL4A2-209ENST00000494852 VAMP4O75379 141 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 BEND3Q5T5X7 828 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.14■□□□□ 0.81
COL4A2-209ENST00000494852 ZNF333Q96JL9 665 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 TEPSINQ96N21 525 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 TMEM106CQ9BVX2 250 aa20.14■□□□□ 0.81
COL4A2-209ENST00000494852 TTF2Q9UNY4 1162 aaKnown RBP20.14■□□□□ 0.81
COL4A2-209ENST00000494852 PLIN1O60240 522 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 GTF2A2P52657 109 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 TDRD3Q9H7E2 651 aaKnown RBP20.13■□□□□ 0.81
COL4A2-209ENST00000494852 ZFYVE28Q9HCC9 887 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 CNNM1Q9NRU3 951 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 OTOFQ9HC10 1997 aa20.13■□□□□ 0.81
COL4A2-209ENST00000494852 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
COL4A2-209ENST00000494852 MAP3K9P80192 1104 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms