RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.01□□□□□ -0.81
RPGR-210ENST00000494841 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 PRICKLE2Q7Z3G6 844 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 TSPAN10Q9H1Z9 355 aaPredicted RBP10.01□□□□□ -0.81
RPGR-210ENST00000494841 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 KIF24Q5T7B8 1368 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 BLMP54132 1417 aaPredicted RBP10□□□□□ -0.81
RPGR-210ENST00000494841 DIAPH1O60610 1272 aaKnown RBP10□□□□□ -0.81
RPGR-210ENST00000494841 VPS72Q15906 364 aa10□□□□□ -0.81
RPGR-210ENST00000494841 TBCELQ5QJ74 424 aa10□□□□□ -0.81
RPGR-210ENST00000494841 ZNF772Q68DY9 489 aaPredicted RBP10□□□□□ -0.81
RPGR-210ENST00000494841 TMEM214Q6NUQ4 689 aaKnown RBP10□□□□□ -0.81
RPGR-210ENST00000494841 CFAP53Q96M91 514 aa10□□□□□ -0.81
RPGR-210ENST00000494841 TRPC5Q9UL62 973 aaPredicted RBP10□□□□□ -0.81
RPGR-210ENST00000494841 CDK12Q9NYV4 1490 aaPredicted RBP9.99□□□□□ -0.81
RPGR-210ENST00000494841 C21orf2O43822 256 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 RHOQP17081 205 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 POU4F2Q12837 409 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 GNASQ5JWF2 1037 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 NBPF10Q6P3W6 841 aaKnown RBP9.99□□□□□ -0.81
RPGR-210ENST00000494841 NBPF15Q8N660 670 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 RHBDD1Q8TEB9 315 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 HINFPQ9BQA5 517 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 USTQ9Y2C2 406 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 SPATA31A1Q5TZJ5 1347 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 SPATA31A5Q5VU36 1347 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 SPATA31A7Q8IWB4 1347 aa9.99□□□□□ -0.81
RPGR-210ENST00000494841 ABCC6O95255 1503 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 CARNS1A5YM72 827 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 U2SURPO15042 1029 aaKnown RBP9.98□□□□□ -0.81
RPGR-210ENST00000494841 C4orf17Q53FE4 359 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 CARD10Q9BWT7 1032 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.98□□□□□ -0.81
RPGR-210ENST00000494841 ATRNO75882 1429 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 CRB1P82279 1406 aa9.98□□□□□ -0.81
RPGR-210ENST00000494841 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
RPGR-210ENST00000494841 HMOX1P09601 288 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
RPGR-210ENST00000494841 WEE1P30291 646 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 TAS1R3Q7RTX0 852 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 TCP11L2Q8N4U5 519 aa9.97□□□□□ -0.81
RPGR-210ENST00000494841 CLP1Q92989 425 aaKnown RBP9.97□□□□□ -0.81
RPGR-210ENST00000494841 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.82
RPGR-210ENST00000494841 RXRBP28702 533 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.82
RPGR-210ENST00000494841 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.82
RPGR-210ENST00000494841 OCLNQ16625 522 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 SCG3Q8WXD2 468 aaKnown RBP9.96□□□□□ -0.82
RPGR-210ENST00000494841 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
RPGR-210ENST00000494841 MRS2Q9HD23 443 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 GLI3P10071 1580 aa9.96□□□□□ -0.82
RPGR-210ENST00000494841 SENP3-EIF4A1A0A087X0R7 540 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 PRMT3O60678 531 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 IGFBP4P22692 258 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 PTSQ03393 145 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 IGSF1Q8N6C5 1336 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 EP400Q96L91 3159 aa9.95□□□□□ -0.82
RPGR-210ENST00000494841 RGPD1P0DJD0 1748 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 FAM208AQ9UK61 1670 aaKnown RBP9.94□□□□□ -0.82
RPGR-210ENST00000494841 PHKA2P46019 1235 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 PSMA6P60900 246 aaKnown RBP9.94□□□□□ -0.82
RPGR-210ENST00000494841 TEAD4Q15561 434 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 PRIMPOLQ96LW4 560 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
RPGR-210ENST00000494841 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
RPGR-210ENST00000494841 PPP1R12BO60237 982 aaPredicted RBP9.93□□□□□ -0.82
RPGR-210ENST00000494841 IL2RBP14784 551 aa9.93□□□□□ -0.82
RPGR-210ENST00000494841 SH3PXD2AQ5TCZ1 1133 aa9.93□□□□□ -0.82
RPGR-210ENST00000494841 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
RPGR-210ENST00000494841 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
RPGR-210ENST00000494841 SLC35F4A4IF30 521 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 EML1O00423 815 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 TATP17735 454 aaPredicted RBP9.92□□□□□ -0.82
RPGR-210ENST00000494841 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
RPGR-210ENST00000494841 FAM182BQ5T319 152 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 STAG2Q8N3U4 1231 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 TIMMDC1Q9NPL8 285 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
RPGR-210ENST00000494841 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 MEGF6O75095 1541 aa9.92□□□□□ -0.82
RPGR-210ENST00000494841 SERTM1A2A2V5 107 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 CCER2I3L3R5 266 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 EXOC5O00471 708 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 ATP2B4P23634 1241 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 NOS2P35228 1153 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 HIRAP54198 1017 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms