RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PIH1D3Q9NQM4 214 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-212ENST00000494815 BLOC1S2Q6QNY1 142 aa22.04■■□□□ 1.12
TSPAN4-212ENST00000494815 ALDH8A1Q9H2A2 487 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-212ENST00000494815 ZNF804BA4D1E1 1349 aa22.03■■□□□ 1.12
TSPAN4-212ENST00000494815 TM4SF1P30408 202 aa22.03■■□□□ 1.12
TSPAN4-212ENST00000494815 KLHL40Q2TBA0 621 aa22.03■■□□□ 1.12
TSPAN4-212ENST00000494815 CYP21A2P08686 494 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 CPA1P15085 419 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 BCAMP50895 628 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 SLC9C2Q5TAH2 1124 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 PPP1R9BQ96SB3 815 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 ANKRD2Q9GZV1 360 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 TAF1P21675 1872 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 IDH1O75874 414 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 HSP90AA2PQ14568 343 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 CCDC24Q8N4L8 307 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 TAF6LQ9Y6J9 622 aa22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 TNRC6CQ9HCJ0 1690 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-212ENST00000494815 BAG4O95429 457 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 RPS6KB1P23443 525 aa22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 ANKRD1Q15327 319 aa22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 PRR5LQ6MZQ0 368 aa22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 ZSCAN31Q96LW9 406 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 GNL3LQ9NVN8 582 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 APBA3O96018 575 aa22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 PUS7LQ9H0K6 701 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 SH2B1Q9NRF2 756 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-212ENST00000494815 MAP3K12Q12852 859 aa22■■□□□ 1.11
TSPAN4-212ENST00000494815 CTNNA3Q9UI47 895 aa22■■□□□ 1.11
TSPAN4-212ENST00000494815 PDE6AP16499 860 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 NASPP49321 788 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 CAVIN4Q5BKX8 364 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 NEK1Q96PY6 1258 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 GPAA1O43292 621 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 SERPINB2P05120 415 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 ST5P78524 1137 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 DDX49Q9Y6V7 483 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
TSPAN4-212ENST00000494815 TCRBV5S4A2TA0A5A2 114 aa21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 GRAPQ13588 217 aa21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 AKT1S1Q96B36 256 aa21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 TFCP2L1Q9NZI6 479 aa21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 ZNF532Q9HCE3 1301 aa21.98■■□□□ 1.11
TSPAN4-212ENST00000494815 FOXP2O15409 715 aa21.97■■□□□ 1.11
TSPAN4-212ENST00000494815 CRY2Q49AN0 593 aa21.97■■□□□ 1.11
TSPAN4-212ENST00000494815 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
TSPAN4-212ENST00000494815 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-212ENST00000494815 TPM2P07951 284 aa21.96■■□□□ 1.11
TSPAN4-212ENST00000494815 GYG1P46976 350 aa21.96■■□□□ 1.11
TSPAN4-212ENST00000494815 ANP32BQ92688 251 aaKnown RBP21.96■■□□□ 1.11
TSPAN4-212ENST00000494815 SEMA3EO15041 775 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 VPS37DQ86XT2 251 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 FLAD1Q8NFF5 587 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 MYO5AQ9Y4I1 1855 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 ZBTB22O15209 634 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 FBXO33Q7Z6M2 555 aa21.95■■□□□ 1.1
TSPAN4-212ENST00000494815 ZNF445P59923 1031 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 DDR1Q08345 913 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 COL9A3Q14050 684 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 STOX1Q6ZVD7 989 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 DENND2AQ9ULE3 1009 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 RGPD3A6NKT7 1758 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 RGPD4Q7Z3J3 1758 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 PDS5AQ29RF7 1337 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 FGAP02671 866 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 ZSCAN30Q86W11 494 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 MAGEB6Q8N7X4 407 aa21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-212ENST00000494815 WTIPA6NIX2 430 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 PKP1Q13835 747 aa21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 TOB2Q14106 344 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 NLGN1Q8N2Q7 840 aa21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 AIDAQ96BJ3 306 aa21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 LARP6Q9BRS8 491 aaKnown RBP21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 TPCN1Q9ULQ1 816 aa21.93■■□□□ 1.1
TSPAN4-212ENST00000494815 E7EWF7 191 aa21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 LARGE1O95461 756 aa21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 ME3Q16798 604 aa21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 DHX32Q7L7V1 743 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 TTLL5Q6EMB2 1281 aa21.92■■□□□ 1.1
TSPAN4-212ENST00000494815 TCEANC2Q96MN5 208 aa21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 STRBPQ96SI9 672 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 COL1A1P02452 1464 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 KLRG2A4D1S0 409 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 MCTP1Q6DN14 999 aa21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 RBM17Q96I25 401 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 LEMD3Q9Y2U8 911 aa21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 ZDHHC9Q9Y397 364 aa21.91■■□□□ 1.1
TSPAN4-212ENST00000494815 ZMYM6O95789 1325 aa21.9■■□□□ 1.1
TSPAN4-212ENST00000494815 BRD1O95696 1058 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms