RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 EGFRP00533 1210 aa19.73■□□□□ 0.75
LIME1-209ENST00000494776 TFCP2Q12800 502 aa19.73■□□□□ 0.75
LIME1-209ENST00000494776 C20orf194Q5TEA3 1177 aa19.73■□□□□ 0.75
LIME1-209ENST00000494776 SSH3Q8TE77 659 aa19.73■□□□□ 0.75
LIME1-209ENST00000494776 MMP14P50281 582 aa19.72■□□□□ 0.75
LIME1-209ENST00000494776 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
LIME1-209ENST00000494776 POLA2Q14181 598 aa19.72■□□□□ 0.75
LIME1-209ENST00000494776 DCPSQ96C86 337 aaKnown RBP19.72■□□□□ 0.75
LIME1-209ENST00000494776 PGAP2Q9UHJ9 254 aa19.72■□□□□ 0.75
LIME1-209ENST00000494776 F8W031 263 aaPredicted RBP19.71■□□□□ 0.75
LIME1-209ENST00000494776 SURF6O75683 361 aaKnown RBP19.71■□□□□ 0.75
LIME1-209ENST00000494776 FKBP1AP62942 108 aaKnown RBP19.71■□□□□ 0.75
LIME1-209ENST00000494776 HTRA3P83110 453 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 SCARF1Q14162 830 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 MFSD14BQ5SR56 506 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 CEP85Q6P2H3 762 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 GNL3LQ9NVN8 582 aaKnown RBP19.71■□□□□ 0.75
LIME1-209ENST00000494776 FAM205AQ6ZU69 1335 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 PASKQ96RG2 1323 aa19.71■□□□□ 0.75
LIME1-209ENST00000494776 CDC37L1Q7L3B6 337 aa19.7■□□□□ 0.74
LIME1-209ENST00000494776 CERS5Q8N5B7 392 aa19.7■□□□□ 0.74
LIME1-209ENST00000494776 NEUROD6Q96NK8 337 aa19.7■□□□□ 0.74
LIME1-209ENST00000494776 GLIS2Q9BZE0 524 aaPredicted RBP19.7■□□□□ 0.74
LIME1-209ENST00000494776 TIMM10P62072 90 aa19.69■□□□□ 0.74
LIME1-209ENST00000494776 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
LIME1-209ENST00000494776 GGA3Q9NZ52 723 aa19.69■□□□□ 0.74
LIME1-209ENST00000494776 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 TMEM88BA6NKF7 163 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 TRAF5O00463 557 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 GORABQ5T7V8 394 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 KRT26Q7Z3Y9 468 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 USP48Q86UV5 1035 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 DNAJC5GQ8N7S2 189 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 TBC1D22AQ8WUA7 517 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 KLRG1Q96E93 195 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 CREBZFQ9NS37 354 aa19.68■□□□□ 0.74
LIME1-209ENST00000494776 HMMRO75330 724 aa19.67■□□□□ 0.74
LIME1-209ENST00000494776 ADORA1P30542 326 aa19.67■□□□□ 0.74
LIME1-209ENST00000494776 RBM5P52756 815 aaKnown RBP eCLIP19.67■□□□□ 0.74
LIME1-209ENST00000494776 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
LIME1-209ENST00000494776 DLGAP5Q15398 846 aa19.67■□□□□ 0.74
LIME1-209ENST00000494776 ANGEL2Q5VTE6 544 aaKnown RBP19.67■□□□□ 0.74
LIME1-209ENST00000494776 SULF1Q8IWU6 871 aa19.67■□□□□ 0.74
LIME1-209ENST00000494776 RPAP2Q8IXW5 612 aaPredicted RBP19.67■□□□□ 0.74
LIME1-209ENST00000494776 FMR1Q06787 632 aaKnown RBP eCLIP19.66■□□□□ 0.74
LIME1-209ENST00000494776 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
LIME1-209ENST00000494776 XAGE2Q96GT9 111 aa19.66■□□□□ 0.74
LIME1-209ENST00000494776 ZNF408Q9H9D4 720 aa19.66■□□□□ 0.74
LIME1-209ENST00000494776 TTF2Q9UNY4 1162 aaKnown RBP19.66■□□□□ 0.74
LIME1-209ENST00000494776 NOP58Q9Y2X3 529 aaKnown RBP19.66■□□□□ 0.74
LIME1-209ENST00000494776 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
LIME1-209ENST00000494776 ASTN2O75129 1339 aaPredicted RBP19.66■□□□□ 0.74
LIME1-209ENST00000494776 WNT10BO00744 389 aa19.65■□□□□ 0.74
LIME1-209ENST00000494776 PHKA1P46020 1223 aa19.65■□□□□ 0.74
LIME1-209ENST00000494776 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
LIME1-209ENST00000494776 WDR66Q8TBY9 1149 aa19.65■□□□□ 0.74
LIME1-209ENST00000494776 DENND2AQ9ULE3 1009 aa19.65■□□□□ 0.74
LIME1-209ENST00000494776 CELF2O95319 508 aaKnown RBP19.64■□□□□ 0.73
LIME1-209ENST00000494776 CFAP100Q494V2 611 aa19.64■□□□□ 0.73
LIME1-209ENST00000494776 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
LIME1-209ENST00000494776 ABT1Q9ULW3 272 aaKnown RBP19.64■□□□□ 0.73
LIME1-209ENST00000494776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.64■□□□□ 0.73
LIME1-209ENST00000494776 ADM5C9JUS6 153 aa19.63■□□□□ 0.73
LIME1-209ENST00000494776 SEMA3EO15041 775 aa19.63■□□□□ 0.73
LIME1-209ENST00000494776 MYO1BO43795 1136 aa19.63■□□□□ 0.73
LIME1-209ENST00000494776 ERC1Q8IUD2 1116 aa19.63■□□□□ 0.73
LIME1-209ENST00000494776 EXOC6BQ9Y2D4 811 aa19.63■□□□□ 0.73
LIME1-209ENST00000494776 PITPNM2Q9BZ72 1349 aa19.62■□□□□ 0.73
LIME1-209ENST00000494776 TNNI3KQ59H18 835 aa19.62■□□□□ 0.73
LIME1-209ENST00000494776 GPR108Q9NPR9 543 aa19.62■□□□□ 0.73
LIME1-209ENST00000494776 FPGT-TNNI3KV9GXZ4 949 aa19.62■□□□□ 0.73
LIME1-209ENST00000494776 CST9Q5W186 159 aa19.61■□□□□ 0.73
LIME1-209ENST00000494776 DLK2Q6UY11 383 aa19.61■□□□□ 0.73
LIME1-209ENST00000494776 MTMR14Q8NCE2 650 aa19.61■□□□□ 0.73
LIME1-209ENST00000494776 SERPINA10Q9UK55 444 aa19.61■□□□□ 0.73
LIME1-209ENST00000494776 SUGT1Q9Y2Z0 365 aa19.61■□□□□ 0.73
LIME1-209ENST00000494776 MAST3O60307 1309 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 SPDYE2BA6NHP3 402 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 SPDYE6P0CI01 402 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 GRIK5Q16478 980 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 APOBEC3FQ8IUX4 373 aaKnown RBP19.6■□□□□ 0.73
LIME1-209ENST00000494776 JMYQ8N9B5 988 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 ZBED3Q96IU2 234 aaPredicted RBP19.6■□□□□ 0.73
LIME1-209ENST00000494776 MKRN1Q9UHC7 482 aaKnown RBP19.6■□□□□ 0.73
LIME1-209ENST00000494776 SCAF8Q9UPN6 1271 aaKnown RBP19.6■□□□□ 0.73
LIME1-209ENST00000494776 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
LIME1-209ENST00000494776 APBB1O00213 710 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 CRKP46108 304 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 CCDC158Q5M9N0 1113 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 SIRT2Q8IXJ6 389 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 ZGPATQ8N5A5 531 aaKnown RBP19.59■□□□□ 0.73
LIME1-209ENST00000494776 TEKT1Q969V4 418 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 PRMT6Q96LA8 375 aaPredicted RBP19.59■□□□□ 0.73
LIME1-209ENST00000494776 ARAP2Q8WZ64 1704 aa19.59■□□□□ 0.73
LIME1-209ENST00000494776 CLRN2A0PK11 232 aa19.58■□□□□ 0.72
LIME1-209ENST00000494776 LDHBP07195 334 aaKnown RBP19.58■□□□□ 0.72
LIME1-209ENST00000494776 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.72
LIME1-209ENST00000494776 HDLBPQ00341 1268 aaKnown RBP19.58■□□□□ 0.72
LIME1-209ENST00000494776 RASGRF1Q13972 1273 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms