RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 FAM204AQ9H8W3 233 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 SUFUQ9UMX1 484 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 ZSCAN12O43309 604 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 MTF1Q14872 753 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
LINC00488-201ENST00000494582 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 AGLP35573 1532 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 PPFIA4O75335 1185 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
LINC00488-201ENST00000494582 LIG3P49916 1009 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 OS9Q13438 667 aaPredicted RBP11.68□□□□□ -0.54
LINC00488-201ENST00000494582 MTX1Q13505 466 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 CASP8Q14790 479 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 FBXW10Q5XX13 1052 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 CCDC12Q8WUD4 166 aaPredicted RBP11.68□□□□□ -0.54
LINC00488-201ENST00000494582 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
LINC00488-201ENST00000494582 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
LINC00488-201ENST00000494582 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 EXOC5O00471 708 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 MSANTD4Q8NCY6 345 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 CLIC4Q9Y696 253 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 ITSN1Q15811 1721 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 WDHD1O75717 1129 aaPredicted RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 RHOXF2BP0C7M4 288 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 HNRNPH1P31943 449 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 RHOXF2Q9BQY4 288 aa11.67□□□□□ -0.54
LINC00488-201ENST00000494582 NCOA5Q9HCD5 579 aaKnown RBP11.67□□□□□ -0.54
LINC00488-201ENST00000494582 PTPDC1A2A3K4 754 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 SERPINC1P01008 464 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 MAP2K2P36507 400 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 TC2NQ8N9U0 490 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 TAF5LO75529 589 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 SYF2O95926 243 aaKnown RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 TBX2Q13207 712 aaPredicted RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 ADALQ6DHV7 355 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 AACSQ86V21 672 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 FAM71BQ8TC56 605 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00488-201ENST00000494582 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 JCADQ9P266 1359 aa11.66□□□□□ -0.54
LINC00488-201ENST00000494582 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 MSL3Q8N5Y2 521 aaKnown RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 CARD10Q9BWT7 1032 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 CCDC8Q9H0W5 538 aaPredicted RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 EHD4Q9H223 541 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 RGPD1P0DJD0 1748 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 IKBKBO14920 756 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 RNF40O75150 1001 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 PRPF6O94906 941 aaKnown RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 ZNF202O95125 648 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 PDILTQ8N807 584 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 LINC00301Q8NCQ3 95 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 DNAAF4Q8WXU2 420 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 ZNF396Q96N95 335 aaPredicted RBP11.65□□□□□ -0.54
LINC00488-201ENST00000494582 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 ALKQ9UM73 1620 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 MROH7-TTC4A0A0A0MT08 1334 aa11.65□□□□□ -0.54
LINC00488-201ENST00000494582 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
LINC00488-201ENST00000494582 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 LZTFL1Q9NQ48 299 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 CHD1O14646 1710 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 PFKFB2O60825 505 aa11.64□□□□□ -0.55
LINC00488-201ENST00000494582 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms