RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-225ENST00000494465 TTLL5Q6EMB2 1281 aa19.7■□□□□ 0.74
ATG4B-225ENST00000494465 TRAK2O60296 914 aa19.69■□□□□ 0.74
ATG4B-225ENST00000494465 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
ATG4B-225ENST00000494465 ZNF532Q9HCE3 1301 aa19.69■□□□□ 0.74
ATG4B-225ENST00000494465 GYS1P13807 737 aa19.69■□□□□ 0.74
ATG4B-225ENST00000494465 CCDC83Q8IWF9 413 aa19.69■□□□□ 0.74
ATG4B-225ENST00000494465 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-225ENST00000494465 E7EWF7 191 aa19.68■□□□□ 0.74
ATG4B-225ENST00000494465 FGAP02671 866 aa19.68■□□□□ 0.74
ATG4B-225ENST00000494465 TXNRD1Q16881 649 aa19.67■□□□□ 0.74
ATG4B-225ENST00000494465 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
ATG4B-225ENST00000494465 COL1A1P02452 1464 aaPredicted RBP19.67■□□□□ 0.74
ATG4B-225ENST00000494465 GYG1P46976 350 aa19.66■□□□□ 0.74
ATG4B-225ENST00000494465 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
ATG4B-225ENST00000494465 CTNNA3Q9UI47 895 aa19.66■□□□□ 0.74
ATG4B-225ENST00000494465 HMGB1P09429 215 aaKnown RBP19.65■□□□□ 0.74
ATG4B-225ENST00000494465 EXOSC10Q01780 885 aaKnown RBP19.65■□□□□ 0.74
ATG4B-225ENST00000494465 Q6ZUG5 572 aa19.65■□□□□ 0.74
ATG4B-225ENST00000494465 DHX32Q7L7V1 743 aaKnown RBP19.65■□□□□ 0.74
ATG4B-225ENST00000494465 MAP3K12Q12852 859 aa19.65■□□□□ 0.74
ATG4B-225ENST00000494465 PRR5LQ6MZQ0 368 aa19.65■□□□□ 0.74
ATG4B-225ENST00000494465 SMC3Q9UQE7 1217 aa19.65■□□□□ 0.74
ATG4B-225ENST00000494465 FOXD4L5Q5VV16 416 aaPredicted RBP19.64■□□□□ 0.74
ATG4B-225ENST00000494465 MAGEB6Q8N7X4 407 aa19.64■□□□□ 0.74
ATG4B-225ENST00000494465 FOXD4L4Q8WXT5 416 aaPredicted RBP19.64■□□□□ 0.74
ATG4B-225ENST00000494465 CHAMP1Q96JM3 812 aa19.64■□□□□ 0.74
ATG4B-225ENST00000494465 FAM84BQ96KN1 310 aaPredicted RBP19.64■□□□□ 0.74
ATG4B-225ENST00000494465 STRBPQ96SI9 672 aaKnown RBP19.64■□□□□ 0.73
ATG4B-225ENST00000494465 AGXT2Q9BYV1 514 aa19.64■□□□□ 0.73
ATG4B-225ENST00000494465 IQSEC3Q9UPP2 1182 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-225ENST00000494465 DTNBO60941 627 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 PTMSP20962 102 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 KLRK1P26718 216 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 LRRC2Q9BYS8 371 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 MYH13Q9UKX3 1938 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 NPHP1O15259 732 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 GJB2P29033 226 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 IMMTQ16891 758 aaKnown RBP19.63■□□□□ 0.73
ATG4B-225ENST00000494465 FBXO33Q7Z6M2 555 aa19.63■□□□□ 0.73
ATG4B-225ENST00000494465 WDR33Q9C0J8 1336 aaKnown RBP19.63■□□□□ 0.73
ATG4B-225ENST00000494465 SYT1P21579 422 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 HAND2P61296 217 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 ANKRD2Q9GZV1 360 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 GOLGA6L22H0YM25 854 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 PLSCR1O15162 318 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
ATG4B-225ENST00000494465 CACNA1SQ13698 1873 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 CAVIN4Q5BKX8 364 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 SLC51AQ86UW1 340 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 GNL3LQ9NVN8 582 aaKnown RBP19.61■□□□□ 0.73
ATG4B-225ENST00000494465 IRS2Q9Y4H2 1338 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 SERPINB2P05120 415 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 GRAPQ13588 217 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-225ENST00000494465 BRF1Q92994 677 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 AIDAQ96BJ3 306 aa19.61■□□□□ 0.73
ATG4B-225ENST00000494465 TCHHQ07283 1943 aa19.6■□□□□ 0.73
ATG4B-225ENST00000494465 STX6O43752 255 aa19.6■□□□□ 0.73
ATG4B-225ENST00000494465 DDR1Q08345 913 aa19.6■□□□□ 0.73
ATG4B-225ENST00000494465 CRY2Q49AN0 593 aa19.6■□□□□ 0.73
ATG4B-225ENST00000494465 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 SKOR2Q2VWA4 1001 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-225ENST00000494465 GTF3C6Q969F1 213 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 ZNF213O14771 459 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 MBD4O95243 580 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 STK3Q13188 491 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 FBXL16Q8N461 479 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 LRP2BPQ9P2M1 347 aa19.59■□□□□ 0.73
ATG4B-225ENST00000494465 ZSCAN22P10073 491 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-225ENST00000494465 ALX1Q15699 326 aa19.58■□□□□ 0.73
ATG4B-225ENST00000494465 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-225ENST00000494465 AKT1S1Q96B36 256 aa19.58■□□□□ 0.73
ATG4B-225ENST00000494465 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-225ENST00000494465 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.73
ATG4B-225ENST00000494465 ZMYM6O95789 1325 aa19.58■□□□□ 0.73
ATG4B-225ENST00000494465 TNS1Q9HBL0 1735 aaKnown RBP19.58■□□□□ 0.73
ATG4B-225ENST00000494465 POLRMTO00411 1230 aaKnown RBP19.58■□□□□ 0.72
ATG4B-225ENST00000494465 CHST3Q7LGC8 479 aa19.58■□□□□ 0.72
ATG4B-225ENST00000494465 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
ATG4B-225ENST00000494465 GZF1Q9H116 711 aaPredicted RBP19.58■□□□□ 0.72
ATG4B-225ENST00000494465 ARMT1Q9H993 441 aa19.58■□□□□ 0.72
ATG4B-225ENST00000494465 CHD4Q14839 1912 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 PNPLA7Q6ZV29 1317 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
ATG4B-225ENST00000494465 APBA3O96018 575 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 ADGRA1Q86SQ6 560 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 TXNRD3Q86VQ6 643 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 TFCP2L1Q9NZI6 479 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 MTMR6Q9Y217 621 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 SEMA3EO15041 775 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
ATG4B-225ENST00000494465 RXRBP28702 533 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 LCORLQ8N3X6 602 aa19.57■□□□□ 0.72
ATG4B-225ENST00000494465 PDS5AQ29RF7 1337 aaKnown RBP19.56■□□□□ 0.72
ATG4B-225ENST00000494465 PFKFB2O60825 505 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 APPP05067 770 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms