RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 FGD1P98174 961 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 GRM2Q14416 872 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 FOXD4L6Q3SYB3 417 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-216ENST00000493758 RPS26P11Q5JNZ5 115 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-216ENST00000493758 GPAT2Q6NUI2 795 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 FOXD4L3Q6VB84 417 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-216ENST00000493758 TXNRD3Q86VQ6 643 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 NPAS4Q8IUM7 802 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 EHD4Q9H223 541 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 CLEC4MQ9H2X3 399 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-216ENST00000493758 A0A096LPE4 126 aa7.85□□□□□ -1.15
ITGB1-216ENST00000493758 A0A1W2PPZ6 126 aa7.85□□□□□ -1.15
ITGB1-216ENST00000493758 ESRRAP11474 423 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-216ENST00000493758 CD68P34810 354 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-216ENST00000493758 SHISA2Q6UWI4 295 aa7.85□□□□□ -1.15
ITGB1-216ENST00000493758 EPS8L3Q8TE67 593 aaKnown RBP7.85□□□□□ -1.15
ITGB1-216ENST00000493758 ZNF576Q9H609 170 aa7.85□□□□□ -1.15
ITGB1-216ENST00000493758 ANKRD33BA6NCL7 494 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 METTL12A8MUP2 240 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 GIPC1O14908 333 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 B3GALT4O96024 378 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 XRCC5P13010 732 aaKnown RBP7.84□□□□□ -1.15
ITGB1-216ENST00000493758 ATP2B2Q01814 1243 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 C19orf57Q0VDD7 668 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 IKBKEQ14164 716 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 SUZ12Q15022 739 aaKnown RBP7.84□□□□□ -1.15
ITGB1-216ENST00000493758 CCDC27Q2M243 656 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.84□□□□□ -1.15
ITGB1-216ENST00000493758 ANKRD24Q8TF21 1146 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-216ENST00000493758 ZFYVE1Q9HBF4 777 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
ITGB1-216ENST00000493758 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 ADAM11O75078 769 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 PRPF40AO75400 957 aaKnown RBP7.83□□□□□ -1.16
ITGB1-216ENST00000493758 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 ASAP3Q8TDY4 903 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-216ENST00000493758 FRMD6Q96NE9 622 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 NRSN2Q9GZP1 204 aa7.83□□□□□ -1.16
ITGB1-216ENST00000493758 GZF1Q9H116 711 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-216ENST00000493758 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
ITGB1-216ENST00000493758 GATA4P43694 442 aa7.82□□□□□ -1.16
ITGB1-216ENST00000493758 MAPK8P45983 427 aa7.82□□□□□ -1.16
ITGB1-216ENST00000493758 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
ITGB1-216ENST00000493758 CARD10Q9BWT7 1032 aa7.82□□□□□ -1.16
ITGB1-216ENST00000493758 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 SOX1O00570 391 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-216ENST00000493758 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-216ENST00000493758 ARL4DP49703 201 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
ITGB1-216ENST00000493758 PI16Q6UXB8 463 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 BCO2Q9BYV7 579 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 AKTIPQ9H8T0 292 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 USP21Q9UK80 565 aa7.81□□□□□ -1.16
ITGB1-216ENST00000493758 LDHBP07195 334 aaKnown RBP7.8□□□□□ -1.16
ITGB1-216ENST00000493758 NOS3P29474 1203 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 SPRED3Q2MJR0 410 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 DZIP1LQ8IYY4 767 aaKnown RBP7.8□□□□□ -1.16
ITGB1-216ENST00000493758 C3orf58Q8NDZ4 430 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 PPM1HQ9ULR3 514 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
ITGB1-216ENST00000493758 WISP1O95388 367 aa7.79□□□□□ -1.16
ITGB1-216ENST00000493758 GNA15P30679 374 aa7.79□□□□□ -1.16
ITGB1-216ENST00000493758 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
ITGB1-216ENST00000493758 GSTT1P30711 240 aa7.78□□□□□ -1.16
ITGB1-216ENST00000493758 ZNF423Q2M1K9 1284 aa7.78□□□□□ -1.16
ITGB1-216ENST00000493758 UVSSAQ2YD98 709 aa7.78□□□□□ -1.16
ITGB1-216ENST00000493758 EAPPQ56P03 285 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-216ENST00000493758 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
ITGB1-216ENST00000493758 SETDB2Q96T68 719 aa7.78□□□□□ -1.16
ITGB1-216ENST00000493758 MEGF11A6BM72 1044 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 CDC25BP30305 580 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 ACAD11Q709F0 780 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 UBASH3BQ8TF42 649 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 TRIM56Q9BRZ2 755 aaKnown RBP7.77□□□□□ -1.17
ITGB1-216ENST00000493758 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 SUGCTQ9HAC7 445 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 TPSG1Q9NRR2 321 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 FAM8A1Q9UBU6 413 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 WWC3Q9ULE0 1092 aa7.77□□□□□ -1.17
ITGB1-216ENST00000493758 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 AP3B2Q13367 1082 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 NKAPLQ5M9Q1 402 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 HP1BP3Q5SSJ5 553 aaPredicted RBP7.76□□□□□ -1.17
ITGB1-216ENST00000493758 HGSNATQ68CP4 663 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 NXPE4Q6UWF7 544 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 CEP41Q9BYV8 373 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 OSBPL7Q9BZF2 842 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms